Gene Aave_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0904 
Symbol 
ID4666448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp979524 
End bp981761 
Gene Length2238 bp 
Protein Length745 aa 
Translation table11 
GC content69% 
IMG OID639822104 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_969276 
Protein GI120609598 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.405383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCG TGAATCCGTT TGCAAAACTC TTCCCCCGCA GGACCGCGGG AGATGCCTCT 
GCCGGCCAGG ACTCGCTCGC GGCCGCCTCC TACCAGTCGG ACGGCATGCA GAGCGTCCAG
GGGGAGCCTT CGGCGCTGCC GCCGTCGCCG GAAGGCGATT TCGCCGAAGA GGATCTGATC
TCGCTGCCCC TGCTCGGCCG TGCCACGGCG GCGGCGCACC AGCGCCGGCT GCTCACGCTG
CTGGCCGTGG GCGTGGTGGT GCTGGCGCTG ATCGCCGGCT GGGTGCTGAA GCAGGCGGAC
CGTTCCGCCC AGCAGCTCGC CGCCACCGGC CAGGCCCTGA TGCAGTCCCA GCGGCTGGCG
AAGTCGGTCT CGCAGGCACT GGTCGGCAGC CCGCAGGCCT TCCCCGACGT GGTGGACAGC
TCGGGCGTGC TGGTGCGCAA CGTGCGCGCG CTGTCGTCCG GCGACGATGA CCTGGGCGTG
CAGGCCCTGG GCGAACCGTT CAAGCCCGAC CTGGAAGCGA TCACGCCGCT GATGGAGCGC
GCGGAGCGCA ATGCCGGCGT CGTGATGGGC CAGCAGAAGA TCCTCACGCA GGTGGGCGAT
GCGCTGCGCA CCATCAACCG GCAGTCGTCC GACCTGCTGG AGATCGCCGA GACGATCTCC
TCGCTGAAGC TGCAGCAGAA CGCGCCCTCC ACGGACATCT CCGCGTCCGG CCAGCTCGTG
ATGCTGACAC AGCGCATCGG CAAGTCCGCC AACGAGTTCC AGACCACCGA GGGCGTGAGC
CCCGAGGCCG TGTTCCTGCT GGGCAAGGAC CTGAATTCCT TCCGCGAGAT CGCCCAGGGC
ATGCTCGACG GCAGCAGCGA CCTGCGCCTG TCGGCCACGC GCGATCCGCA GACGCGCGAG
CAGCTCGAGA ACCTGATCAA GGTGTACGAC CAGACCCGCG TGCAGGCCGG CGCCATCCTC
GGCAACCTGC AGGGCCTGGT GTCCGCCCGC GAGGCGCAGT CCGCCATCAT TGCCGACAGC
GAGCCGCTGC GCCGCCAACT CGAAGGCCTG CAGACCAAGC TCTCCGGGCA GACCGGCCTG
GGCGCAGGGC AACTGGCCGC CCTGGTGGCC GCCGGCCTGT TCGTGCTGCT GTGCGGCGTG
GGCATTTCCC GCGTCCAGCT GATGGACAGC CGCACCCGCC AGGCCGCTGC CGAAATGCAG
CAGCGCGACG CCCGCCGCCA GGAGCAGGAG GCCAAGCGCG TCAACGACGC CAACCAGGCC
GCCATTCTGC GACTCATGAA CGAACTGCAG TCGGTCGCCG AGGGTGACCT GACGCAGGAA
GCCACCGTGA CGGAAGACAT CACGGGCGCC ATCGCCGACT CGGTGAACTA CACGGTGGAA
GAGCTCCGCC AACTGGTGGG CAGCGTGCAG AACACGGCCA CCCGCGTGGC CCAGACGACG
GCGCAGGTGG ACAGCACTTC GACCGAACTG CTGGCCGCCT CCACCGAACA GCTGCGCGAG
ATCCGCGAAA CCGGCCGCTC GGTGCTCGAC ATGGCGACCC GAATCAACGA GGTGTCCGCG
CAGGCGCAGG AATCGGCCGC GGTGGCGCGC CAGTCGCTGC AGGCCGCGGA CTCCGGTCTG
CAGGCCGTGC AGAACGCCAT CGGCGGCATG AACTCCATCC GCGACCAGAT CCAGGACACC
TCCAAGCGGA TCAAGCGGCT GGGCGAATCG TCGCAGGAGA TCGGTGAAAT CACCGAGCTG
ATTTCCGACA TTACCGAGCA GACGAACGTG CTGGCACTGA ACGCCGCCAT CCAGGCCGCC
TCGGCCGGCG AAGCGGGCCG CGGCTTCTCC GTCGTGGCGG AAGAAGTGCA GCGCCTGGCC
GAACGCTCCG CCGACGCCAC GCGCCAGATC TCGGCGCTGG TGAAAGCCAT TCAGACCGAC
ACGCAGGATG CGGTGGCCGC CATGGAGCGC TCCACGCAGG GTGTGGTGGA AGGCGCGCGC
CTGTCCGACT CCGCCGGCAC GGCCCTGACC GAGATCGACC GCGTGTCGCG GCGCCTCGCC
GAGCTGATCG AGCAGATTTC CTCTTCCGCG TCGCGCGAGG CCGAGCTGGC CAACGGCGTG
GCCGACAACA TCCAGCACAT CTTCGCGGTG ACCGAGCAGA CCGGAGAAGG CACGCGCACC
ACGGCGCAGC AGGTGCGCGA ACTGTCGCAC ATGGCCGAGG AGCTCCGCCA GTCGGTGGCG
CGTTTCAAGA TCGCCTGA
 
Protein sequence
MSVVNPFAKL FPRRTAGDAS AGQDSLAAAS YQSDGMQSVQ GEPSALPPSP EGDFAEEDLI 
SLPLLGRATA AAHQRRLLTL LAVGVVVLAL IAGWVLKQAD RSAQQLAATG QALMQSQRLA
KSVSQALVGS PQAFPDVVDS SGVLVRNVRA LSSGDDDLGV QALGEPFKPD LEAITPLMER
AERNAGVVMG QQKILTQVGD ALRTINRQSS DLLEIAETIS SLKLQQNAPS TDISASGQLV
MLTQRIGKSA NEFQTTEGVS PEAVFLLGKD LNSFREIAQG MLDGSSDLRL SATRDPQTRE
QLENLIKVYD QTRVQAGAIL GNLQGLVSAR EAQSAIIADS EPLRRQLEGL QTKLSGQTGL
GAGQLAALVA AGLFVLLCGV GISRVQLMDS RTRQAAAEMQ QRDARRQEQE AKRVNDANQA
AILRLMNELQ SVAEGDLTQE ATVTEDITGA IADSVNYTVE ELRQLVGSVQ NTATRVAQTT
AQVDSTSTEL LAASTEQLRE IRETGRSVLD MATRINEVSA QAQESAAVAR QSLQAADSGL
QAVQNAIGGM NSIRDQIQDT SKRIKRLGES SQEIGEITEL ISDITEQTNV LALNAAIQAA
SAGEAGRGFS VVAEEVQRLA ERSADATRQI SALVKAIQTD TQDAVAAMER STQGVVEGAR
LSDSAGTALT EIDRVSRRLA ELIEQISSSA SREAELANGV ADNIQHIFAV TEQTGEGTRT
TAQQVRELSH MAEELRQSVA RFKIA