| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4623 |
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| Symbol | |
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| ID | 7972833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4914163 |
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| End bp | 4916475 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795207 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_002946494 |
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| Protein GI | 239817584 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.408638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTCGA TCGCCGACAA GTTCAAGAAA TTACTGCCCG CGAACAGCGG CAACGACAAG
GCCCGCGTCG ACGGCTCCGG TTCCATATCG CTCGACGACG TCGACACGGT TCAGGCCCTG
GAGGAAAAGA CCATTCGGCT GGCCCGCAAG GACGGCGCGC CGGCCGCGCC GCTGCCCGCC
GGCTTTGCCG ACGAAATGCT CGGCGGCAGC GAGGCGGCCA ACGAGGCGGC ATCGCCCGAA
GGCGCCGTGC CCCAGGCCGC GGGCGGCCGC GCGGGTTCGA ACCCGGCGCG CCAGCAGCGC
GTCCTGGCCA TCATGCTCGC GGTGGTGGTG CTGCTGCTGC TGCTGGTGGC CGGCTCCGCC
ATTCTTCGCG CCGAGCGCCT TGCGCAGCAG GTGGCCGCCA CCGGCCAGTC GCTGATGCAG
TCGCAGCGGC TCGCAAAGTC GATCTCCCAG GCCCTCGTGG GCAGCGCCCC GGCCTTCGTC
GAAGTGAAGG ACAGCGCCGA CGACCTCACG CGCCGCGTGC AGGGCCTGAC CAACGGCGAC
GACGCCCTGC GCCTGGAGCG CGTGGGCAAC CAGTACGACG AGGACATGGC CAAGATCAAC
CCCCTGGTCG TCCGTGCCGA TGCCAGCGCC AAGGTCGTGC TGGCCCAGCG CCAGATCCTG
ACCCAGGTGG GCGCCGCCCT GCGCGACATC AACCAGCAGT CGTCCGCGCT GCTCGAAATG
ACGGAAACCG TCGCTTCGCT GAAGATGCAG CAGAACGCCA CGCTGCCTGA AATCTCGGCG
GCCGGCCAGC TCGTGATGCT GACCCAGCGC ATCGGCAAGT CGACCAACGA GTTCTTCACG
GTCGAGGGCG TGAACCCCGA CGCCGTGTTC CTGCTCGGCA AGGACCTGAA CACCTTCCAG
GAAACCACGC GCGGCCTGCT CGACGGCAAT GCGCAGCAGC GCTTCCCCGG CTCGAAAGAC
CCGCAGACCC GCCAGCAGCT CGAAGCCATT CTCAAGACCT ACGAGCAGAT GCGCACGCAG
GCCTCGGCCA TTCTGGGCAA CCTGCAGGGC CTGGTGGCCG CGCGCGAAGC GCAGGCTTCC
ATCCTGACCG ACAGCGAACC GCTGCGCAAA TCGCTCGGCG AGCTGCAGGA CAAGCTGTCC
GCGCGCACCG GCCTTGGCGC CGGAACGATC GTGATGCTGT TCGTGCTCTC GCTGGCCGCC
CTGGCGCTGG CCGGCGCCAT CGGTTTCGTG CAGGTGCGCG AAGGCCGCGA ACGTGCCGCC
GTTGCAGAGC GCGAGCGTCT CGCGGCCGAG CAGGCCAGCG AAGAGGCCGG CCGCATCAAC
AACGCCAACC AGGCCGCCAT TCTTCGGCTG ATGAACGAAC TGCAGACGGT GGCCGAAGGC
GACCTGACGC AGGAAGCCAC CGTGACCGAG GACATCACCG GCGCCATTGC CGACTCGGTG
AACTACACGG TGGAAGAACT GCGCCTGCTG GTGGGCAACG TGCAGAACAC GGCCACCCGC
GTGGCGCAGA CCACCTCACA GGTGGAAAGC ACCTCCACCG AATTGCTCGC CGCCTCGACC
GAGCAGCTGC GCGAGATTCG CGAAACCGGC CAGTCGGTGG TGACCATGGC CGAGCGGATC
AACGGCGTGT CCTCGCAGGC GCAGGAGTCC GCCACGGTGG CGCGCCAGTC GCTGCAGGCT
GCCTCCTCGG GCCTGCAGGC CGTGCAGAAC GCCATCGGCG GCATGAACTC CATCCGCGAC
CAGATCCAGG AAACCTCCAA GCGCATCAAG CGCCTGGGCG AGTCGTCGCA GGAGATCGGC
GAAATCACCG AGCTGATCTC GGACATTACC GAGCAGACGA ACGTGCTGGC GCTGAACGCC
GCCATCCAGG CCGCATCGGC CGGTGAAGCC GGCCGCGGCT TCTCGGTGGT GGCCGAAGAA
GTGCAGCGCC TGGCTGAACG CTCCGCCGAC GCCACGCGCC AGATCTCGGC GCTGGTGAAG
GCCATTCAGA CCGACACGCA GGACGCGGTG GGCGCCATGG AGCGTTCCAC GCAGGGTGTG
GTCGAAGGGG CCAAGCTGTC CGACAATGCC GGTACCGCGC TATCCGAGAT CGACCGCGTG
TCGCGCCGGC TGGCAGACCT CATCGAGCAG ATTTCGCAGT CCGCCTCCCG CGAGGCCGAT
TCGGCCAACG TGGTGGCCGC CAACATCCAG CACATCTTTG CCGTGACCGA GCAGACCGGA
GAAGGTACCC GCAACACCGC CCAGCAGGTG CGCGAGCTGT CGCAGATGGC CGAGGAACTG
CGCCGCTCGG TGGCCCGATT CAAGATCGCC TGA
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| Protein sequence | MSSIADKFKK LLPANSGNDK ARVDGSGSIS LDDVDTVQAL EEKTIRLARK DGAPAAPLPA
GFADEMLGGS EAANEAASPE GAVPQAAGGR AGSNPARQQR VLAIMLAVVV LLLLLVAGSA
ILRAERLAQQ VAATGQSLMQ SQRLAKSISQ ALVGSAPAFV EVKDSADDLT RRVQGLTNGD
DALRLERVGN QYDEDMAKIN PLVVRADASA KVVLAQRQIL TQVGAALRDI NQQSSALLEM
TETVASLKMQ QNATLPEISA AGQLVMLTQR IGKSTNEFFT VEGVNPDAVF LLGKDLNTFQ
ETTRGLLDGN AQQRFPGSKD PQTRQQLEAI LKTYEQMRTQ ASAILGNLQG LVAAREAQAS
ILTDSEPLRK SLGELQDKLS ARTGLGAGTI VMLFVLSLAA LALAGAIGFV QVREGRERAA
VAERERLAAE QASEEAGRIN NANQAAILRL MNELQTVAEG DLTQEATVTE DITGAIADSV
NYTVEELRLL VGNVQNTATR VAQTTSQVES TSTELLAAST EQLREIRETG QSVVTMAERI
NGVSSQAQES ATVARQSLQA ASSGLQAVQN AIGGMNSIRD QIQETSKRIK RLGESSQEIG
EITELISDIT EQTNVLALNA AIQAASAGEA GRGFSVVAEE VQRLAERSAD ATRQISALVK
AIQTDTQDAV GAMERSTQGV VEGAKLSDNA GTALSEIDRV SRRLADLIEQ ISQSASREAD
SANVVAANIQ HIFAVTEQTG EGTRNTAQQV RELSQMAEEL RRSVARFKIA
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