More than 300 homologs were found in PanDaTox collection
for query gene Lcho_3795 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_3795  methyl-accepting chemotaxis sensory transducer  100 
 
 
383 aa  773    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_0898  methyl-accepting chemotaxis sensory transducer  59.7 
 
 
379 aa  395  1e-109  Rhodoferax ferrireducens T118  Bacteria  normal  0.827974  n/a   
 
 
-
 
NC_004578  PSPTO_0916  methyl-accepting chemotaxis protein, putative  41.25 
 
 
404 aa  227  2e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0789  chemotaxis sensory transducer  38.9 
 
 
405 aa  215  8e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3293  chemotaxis sensory transducer  35.39 
 
 
387 aa  155  9e-37  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1314  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
426 aa  152  1e-35  Thauera sp. MZ1T  Bacteria  normal  0.116934  n/a   
 
 
-
 
NC_009439  Pmen_1571  methyl-accepting chemotaxis sensory transducer  30.59 
 
 
362 aa  129  7.000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_02270  putative chemotaxis transducer  31.88 
 
 
390 aa  110  6e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.319109  normal 
 
 
-
 
NC_009656  PSPA7_0260  putative chemotaxis transducer  30.8 
 
 
391 aa  107  4e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  0.237341  n/a   
 
 
-
 
NC_010524  Lcho_1537  methyl-accepting chemotaxis sensory transducer  27.24 
 
 
377 aa  106  6e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0414655 
 
 
-
 
NC_011138  MADE_03238  chemotaxis sensory transducer  34.84 
 
 
429 aa  91.7  2e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  32.13 
 
 
522 aa  83.6  0.000000000000005  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  32.13 
 
 
522 aa  83.2  0.000000000000007  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_007912  Sde_3111  putative methyl-accepting chemotaxis sensory transducer  31.76 
 
 
397 aa  83.2  0.000000000000007  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  32.13 
 
 
522 aa  82.8  0.00000000000001  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  32.13 
 
 
522 aa  82.8  0.00000000000001  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_011071  Smal_1917  methyl-accepting chemotaxis sensory transducer  28.7 
 
 
396 aa  82.4  0.00000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.386674 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
555 aa  80.1  0.00000000000006  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_007520  Tcr_0759  methyl-accepting chemotaxis sensory transducer  35.84 
 
 
406 aa  79  0.0000000000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2159  methyl-accepting chemotaxis sensory transducer  28.22 
 
 
414 aa  79.3  0.0000000000001  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.67 
 
 
617 aa  78.2  0.0000000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  37.11 
 
 
520 aa  78.6  0.0000000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  39.57 
 
 
541 aa  78.2  0.0000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  30.25 
 
 
405 aa  78.6  0.0000000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_009457  VC0395_A1554  methyl-accepting chemotaxis protein  46.79 
 
 
684 aa  78.6  0.0000000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2251  methyl-accepting chemotaxis sensory transducer  25.57 
 
 
380 aa  77.8  0.0000000000003  Shewanella baltica OS185  Bacteria  normal  0.0952292  n/a   
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.48 
 
 
522 aa  77.4  0.0000000000003  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2094  methyl-accepting chemotaxis sensory transducer  25.57 
 
 
380 aa  77.8  0.0000000000003  Shewanella baltica OS223  Bacteria  normal  0.465964  normal 
 
 
-
 
NC_004578  PSPTO_3577  methyl-accepting chemotaxis protein  42.48 
 
 
542 aa  77.4  0.0000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2483  methyl-accepting chemotaxis sensory transducer  33.17 
 
 
905 aa  77.4  0.0000000000004  Anaeromyxobacter sp. K  Bacteria  normal  0.611307  n/a   
 
 
-
 
NC_011891  A2cp1_2579  methyl-accepting chemotaxis sensory transducer  33.17 
 
 
905 aa  77.4  0.0000000000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.48 
 
 
522 aa  77.4  0.0000000000004  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
555 aa  77  0.0000000000005  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2472  methyl-accepting chemotaxis protein  41.59 
 
 
661 aa  77  0.0000000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.256702  n/a   
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  39.26 
 
 
541 aa  77  0.0000000000005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_009654  Mmwyl1_0457  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
356 aa  77  0.0000000000005  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.54 
 
 
524 aa  77  0.0000000000005  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.11 
 
 
522 aa  77  0.0000000000005  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3664  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
562 aa  77  0.0000000000005  Burkholderia ambifaria MC40-6  Bacteria  normal  0.248385  normal  0.243257 
 
 
-
 
NC_003910  CPS_2733  methyl-accepting chemotaxis protein  29.67 
 
 
485 aa  76.6  0.0000000000007  Colwellia psychrerythraea 34H  Bacteria  normal  0.501844  n/a   
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.54 
 
 
524 aa  76.6  0.0000000000007  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_007005  Psyr_2237  histidine kinase, HAMP region: chemotaxis sensory transducer  40.35 
 
 
661 aa  76.3  0.0000000000008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.551171  normal  0.645339 
 
 
-
 
NC_007298  Daro_3579  chemotaxis sensory transducer  36.71 
 
 
554 aa  76.3  0.0000000000008  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.54 
 
 
524 aa  76.3  0.0000000000008  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  42.28 
 
 
533 aa  76.3  0.0000000000009  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  28.23 
 
 
658 aa  76.3  0.0000000000009  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  30 
 
 
544 aa  76.3  0.0000000000009  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_004578  PSPTO_3237  methyl-accepting chemotaxis protein  35.33 
 
 
771 aa  75.5  0.000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0795  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
529 aa  75.5  0.000000000001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  42.28 
 
 
522 aa  75.9  0.000000000001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3348  histidine kinase, HAMP region: chemotaxis sensory transducer  41.59 
 
 
542 aa  75.5  0.000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.946905  normal  0.024921 
 
 
-
 
NC_009997  Sbal195_0827  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
529 aa  75.9  0.000000000001  Shewanella baltica OS195  Bacteria  normal  normal  0.456094 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  40.3 
 
 
648 aa  75.5  0.000000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009052  Sbal_3564  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
529 aa  75.9  0.000000000001  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
522 aa  75.9  0.000000000001  Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_009997  Sbal195_2368  methyl-accepting chemotaxis sensory transducer  25.29 
 
 
380 aa  75.9  0.000000000001  Shewanella baltica OS195  Bacteria  normal  0.0668336  normal  0.991447 
 
 
-
 
NC_008322  Shewmr7_1877  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
378 aa  75.9  0.000000000001  Shewanella sp. MR-7  Bacteria  normal  0.410986  normal  0.95878 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  42.28 
 
 
522 aa  75.9  0.000000000001  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0820  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
529 aa  75.5  0.000000000001  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00000000219782 
 
 
-
 
NC_012793  GWCH70_0714  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
550 aa  75.1  0.000000000002  Geobacillus sp. WCH70  Bacteria  normal  0.0613025  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
578 aa  75.5  0.000000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007005  Psyr_2188  histidine kinase  40 
 
 
540 aa  75.1  0.000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.035953  normal 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
532 aa  75.1  0.000000000002  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_010717  PXO_01024  chemotaxis protein  28.68 
 
 
366 aa  74.7  0.000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0730182  n/a   
 
 
-
 
NC_008321  Shewmr4_2097  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
378 aa  75.1  0.000000000002  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2106  methyl-accepting chemotaxis sensory transducer  25.95 
 
 
380 aa  75.1  0.000000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  35.19 
 
 
541 aa  75.1  0.000000000002  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_008463  PA14_64920  putative methyl-accepting chemotaxis protein  38.3 
 
 
541 aa  75.1  0.000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1006  methyl-accepting chemotaxis protein  33.71 
 
 
411 aa  74.7  0.000000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_06142  chemotaxis protein  28.68 
 
 
366 aa  74.7  0.000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0352354  n/a   
 
 
-
 
NC_002947  PP_2643  methyl-accepting chemotaxis sensory transducer  33.74 
 
 
550 aa  74.7  0.000000000003  Pseudomonas putida KT2440  Bacteria  normal  0.0855376  normal 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  32.32 
 
 
524 aa  74.7  0.000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_2117  methyl-accepting chemotaxis protein  32.61 
 
 
377 aa  74.7  0.000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_2149  methyl-accepting chemotaxis sensory transducer  33.74 
 
 
541 aa  74.7  0.000000000003  Pseudomonas putida F1  Bacteria  normal  0.608007  normal 
 
 
-
 
NC_007760  Adeh_1374  methyl-accepting chemotaxis sensory transducer  32.68 
 
 
908 aa  74.3  0.000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  39.34 
 
 
511 aa  74.3  0.000000000003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00410  methyl-accepting chemotaxis protein  30.33 
 
 
394 aa  74.3  0.000000000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
523 aa  74.7  0.000000000003  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
580 aa  74.7  0.000000000003  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4414  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
518 aa  74.3  0.000000000003  Delftia acidovorans SPH-1  Bacteria  normal  0.684904  normal 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  40.15 
 
 
679 aa  74.3  0.000000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1697  methyl-accepting chemotaxis protein  40 
 
 
541 aa  73.9  0.000000000004  Methylibium petroleiphilum PM1  Bacteria  normal  0.796497  normal  0.294844 
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.46 
 
 
522 aa  74.3  0.000000000004  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  40.16 
 
 
544 aa  73.9  0.000000000004  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
545 aa  73.9  0.000000000004  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_013124  Afer_1343  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
366 aa  73.9  0.000000000004  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  32.22 
 
 
497 aa  74.3  0.000000000004  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  35.66 
 
 
567 aa  73.9  0.000000000004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1294  methyl-accepting chemotaxis protein  41.41 
 
 
663 aa  73.9  0.000000000004  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.148925  n/a   
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  46.32 
 
 
673 aa  73.6  0.000000000005  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_009439  Pmen_1210  methyl-accepting chemotaxis sensory transducer  37.93 
 
 
540 aa  73.6  0.000000000005  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.289047 
 
 
-
 
NC_010001  Cphy_2084  methyl-accepting chemotaxis sensory transducer  34.87 
 
 
597 aa  73.6  0.000000000005  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  25.26 
 
 
624 aa  73.6  0.000000000005  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  28.46 
 
 
652 aa  73.6  0.000000000005  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2050  methyl-accepting chemotaxis protein  36.32 
 
 
704 aa  73.6  0.000000000006  Colwellia psychrerythraea 34H  Bacteria  normal  0.459277  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.59 
 
 
523 aa  73.6  0.000000000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_011138  MADE_03417  methyl-accepting chemotaxis protein  54.93 
 
 
674 aa  73.2  0.000000000006  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.617562  n/a   
 
 
-
 
NC_007908  Rfer_0120  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.37 
 
 
519 aa  73.2  0.000000000007  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
568 aa  73.2  0.000000000008  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  37.76 
 
 
556 aa  73.2  0.000000000008  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
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