Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2472 |
Symbol | |
ID | 1184124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2729060 |
End bp | 2731045 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393845 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_792284 |
Protein GI | 28869665 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.256702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTTC TTCAGCGAGT GATCGGTGGG TTTGCCGTGC TGGTGGTGTT GCTGCTCGCC ATGGCGGGTA TCAGCTATCA AAGCACCCAT TCGATAAGCG AGCGCATCAG CATCATTACG GGGCAGTCGG CACCGCTAAG CAGGGCGGCG AGTGAGCTTT ACGTGCATGT GCTGCGCGCC AACCAGGCTC TGCTCGGGAT TTTGGTCAGC ACTGACCCCA AACAGATCGA CGAGGGCAAA CAGCCGTTCA ACGACAGCAT GGCGCGCTTC AATCAGCTGC TGGACAGCAT TCCGGCCTAT ACCGGCGACC GTGCCGAGCT GCGCGACAAC CTTAATCAGC AACGCCAACT CAGTACCGCC TACGTAGAGC AGGCGCAAAC CCTGATCGCC AGCCATCGCC AGCACGTTTT GCAGGTGCTG CAGAGCCGCG TCTTGCAGGG TTACAGCAAC AGCGAGGGTG CGCAGCTCAC CGGTTATCTG CGCGATTACA TTGCCCGTGA GCGCACTACA GGTTCGTCCG AGAACGTGGC AGCGGCGGAA AAGCTGCTGT TGGAAGTCGG CAAATCCTAT GAGGGGCTGG CCGCGCACGC CGCCACGCCG GATATTCAGA CATTGCAGCG CGTGCTCAAC CTGCAGGATG AGGTGATCAG CACGCGGGCG CGGGAGCTGA CAGCGGTTGA TCCGCGGGGC GGCCGTATTG CCGGGGTAAT GGTCAATCGC TTGCTCAAAG ACCTGACCGG CGCTGACGGT GTCTATCAGG CCTACCGGCA GGAAGCGGCG CTCGCCGAGC AGGTCGGCAA GCAGCGGCAG GCGGCAGAAG CGCGTTTGCA GGCAACGCTA GACAAGATCG GCGAATTCGG CAATCAGTCG CTGGCAGTTG CCAACGAGGC CAAGGCCGGA GCCGATTCGA CTATCGCCAC CAGCCTCAGT CTGTTGCTGA TCGCCTGCCT GTTGGCGGTG TTGGCGGCAG CCATTATCGG TACATGGGTG GCCTTCAGCC TGCGGCGTCC ACTGGCGGCT TTCCGTGGGG TGCTCAAAAC CCTTTCGGGT GGCGATATGC GGGTGCGTTT CGACGTCAGC CGTCGGGATG AATTCGGTGA GCTGGGCGGC TATCTCAACG AGTTCACCCA GTCCTTGCAG CAGACCTTTC GTGAGCTGAT TGGCTCTGCC GACACGCTCG CACTGACGGC CAGCCAGAAT GCGCAGGTCA GTGAACAGAC CACCCGTGTT GTCGACGAGC AGAAAGACCG TTTGAACTCG GCGGCTTCGG CGATGAATGA AATGGAAAGC ACCGTCGAAG AAGTGGCCCG CCGTGCGCAG GACACGCGCA GTGCGGTGGA CAGCACCAGC GAGCTGACCA ACAAGGTACA GAAGCGTGTG GCAGAAACCA TCGTCAACAT TCGCCAACAG GCCGAGCAGG TCAACAAGGC GTCGGCGGTG ACTGATGAAT TGCAGAAGTA CGGGCAGAAC ATCGACGGTA TTGTCGATGC CATTCGCACG ATTGCCGAAC AGACCAACCT GCTGGCCCTC AACGCAGCTA TCGAGGCTGC GCGTGCCGGG GAGCAGGGCA GAGGCTTTGC GGTGGTCGCC GACGAAGTGC GCTCACTGGC CAGTCGTACC CAGACATCGA CCAGCGAGAT CCAGGAAATG ATCGGCCAGA TGCAGAGCAA GATTCACTCG GCCGTGCAGG TCATGAACGA AAGCCAGATC CAGTCCAATC ATTGCGTGAC GCTGGCCTCC GGTGCCGATG AGTTGCTGGT GGAAATGAGC GAGGCGGTCG ATACGACTCG TGACATGAAC ATCCAGATTG CTGCCGCCAC CGAGGAGCAG AGTGCCACTG TGCAGGAAAC CAGCCGCATG GTCACGCACA TCAGTGATTC TGCACAGCAG GCGGCCGACG GTGCCGAACA GTCTGCCAGC AGCAGTCAGG ACCTGTCGAA AATGGCCAGG GATCAGCGCG AGCTGCTCCA TCATTTCAGC GTTTGA
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Protein sequence | MTVLQRVIGG FAVLVVLLLA MAGISYQSTH SISERISIIT GQSAPLSRAA SELYVHVLRA NQALLGILVS TDPKQIDEGK QPFNDSMARF NQLLDSIPAY TGDRAELRDN LNQQRQLSTA YVEQAQTLIA SHRQHVLQVL QSRVLQGYSN SEGAQLTGYL RDYIARERTT GSSENVAAAE KLLLEVGKSY EGLAAHAATP DIQTLQRVLN LQDEVISTRA RELTAVDPRG GRIAGVMVNR LLKDLTGADG VYQAYRQEAA LAEQVGKQRQ AAEARLQATL DKIGEFGNQS LAVANEAKAG ADSTIATSLS LLLIACLLAV LAAAIIGTWV AFSLRRPLAA FRGVLKTLSG GDMRVRFDVS RRDEFGELGG YLNEFTQSLQ QTFRELIGSA DTLALTASQN AQVSEQTTRV VDEQKDRLNS AASAMNEMES TVEEVARRAQ DTRSAVDSTS ELTNKVQKRV AETIVNIRQQ AEQVNKASAV TDELQKYGQN IDGIVDAIRT IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRSLASRT QTSTSEIQEM IGQMQSKIHS AVQVMNESQI QSNHCVTLAS GADELLVEMS EAVDTTRDMN IQIAAATEEQ SATVQETSRM VTHISDSAQQ AADGAEQSAS SSQDLSKMAR DQRELLHHFS V
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