More than 300 homologs were found in PanDaTox collection
for query gene Sden_3293 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_3293  chemotaxis sensory transducer  100 
 
 
387 aa  791    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0916  methyl-accepting chemotaxis protein, putative  39.64 
 
 
404 aa  226  5.0000000000000005e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0789  chemotaxis sensory transducer  40 
 
 
405 aa  219  5e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1314  methyl-accepting chemotaxis sensory transducer  39.87 
 
 
426 aa  179  9e-44  Thauera sp. MZ1T  Bacteria  normal  0.116934  n/a   
 
 
-
 
NC_007908  Rfer_0898  methyl-accepting chemotaxis sensory transducer  34.63 
 
 
379 aa  176  9e-43  Rhodoferax ferrireducens T118  Bacteria  normal  0.827974  n/a   
 
 
-
 
NC_010524  Lcho_3795  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
383 aa  173  5e-42  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009439  Pmen_1571  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
362 aa  153  4e-36  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1537  methyl-accepting chemotaxis sensory transducer  29.69 
 
 
377 aa  127  5e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0414655 
 
 
-
 
NC_008463  PA14_02270  putative chemotaxis transducer  38.32 
 
 
390 aa  99  1e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.319109  normal 
 
 
-
 
NC_009656  PSPA7_0260  putative chemotaxis transducer  40.54 
 
 
391 aa  96.3  9e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  0.237341  n/a   
 
 
-
 
NC_013512  Sdel_1073  chemotaxis sensory transducer  36.16 
 
 
633 aa  95.1  2e-18  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00919731  n/a   
 
 
-
 
NC_007298  Daro_1140  chemotaxis sensory transducer  34.07 
 
 
418 aa  95.1  2e-18  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2117  methyl-accepting chemotaxis protein  34.76 
 
 
377 aa  92.8  9e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_3036  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
570 aa  92.4  1e-17  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2449  methyl-accepting chemotaxis sensory transducer  27.42 
 
 
493 aa  91.7  2e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0821  methyl-accepting chemotaxis sensory transducer  33.19 
 
 
696 aa  91.7  2e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  28.44 
 
 
405 aa  89.7  7e-17  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_011830  Dhaf_4649  methyl-accepting chemotaxis sensory transducer  43.59 
 
 
653 aa  90.1  7e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
515 aa  89.7  8e-17  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2094  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
380 aa  89.4  1e-16  Shewanella baltica OS223  Bacteria  normal  0.465964  normal 
 
 
-
 
NC_013522  Taci_0283  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
420 aa  89  1e-16  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2251  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
380 aa  89.4  1e-16  Shewanella baltica OS185  Bacteria  normal  0.0952292  n/a   
 
 
-
 
NC_009997  Sbal195_2368  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
380 aa  89.4  1e-16  Shewanella baltica OS195  Bacteria  normal  0.0668336  normal  0.991447 
 
 
-
 
NC_009052  Sbal_2106  methyl-accepting chemotaxis sensory transducer  33.53 
 
 
380 aa  87.8  3e-16  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0389  methyl-accepting chemotaxis sensory transducer  53.75 
 
 
587 aa  87.4  4e-16  Thermoanaerobacter sp. X514  Bacteria  normal  0.074674  n/a   
 
 
-
 
NC_007520  Tcr_0759  methyl-accepting chemotaxis sensory transducer  28.44 
 
 
406 aa  87.4  4e-16  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0347  methyl-accepting chemotaxis sensory transducer  31.25 
 
 
706 aa  87.4  4e-16  Methanospirillum hungatei JF-1  Archaea  normal  0.765539  normal  0.695737 
 
 
-
 
NC_009802  CCC13826_0840  cache domain-contain protein  35.09 
 
 
566 aa  87  5e-16  Campylobacter concisus 13826  Bacteria  normal  0.287851  n/a   
 
 
-
 
NC_007298  Daro_0674  PAS  42.95 
 
 
544 aa  86.7  6e-16  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  29.15 
 
 
522 aa  86.7  6e-16  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003516  methyl-accepting chemotaxis protein  39.13 
 
 
672 aa  86.3  9e-16  Vibrio sp. Ex25  Bacteria  normal  0.0337071  n/a   
 
 
-
 
NC_007912  Sde_3111  putative methyl-accepting chemotaxis sensory transducer  35.45 
 
 
397 aa  86.3  9e-16  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4331  methyl-accepting chemotaxis sensory transducer  31.82 
 
 
628 aa  85.9  0.000000000000001  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4075  methyl-accepting chemotaxis sensory transducer  41.73 
 
 
429 aa  85.9  0.000000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000819569  n/a   
 
 
-
 
NC_009616  Tmel_0144  methyl-accepting chemotaxis sensory transducer  40.35 
 
 
537 aa  86.3  0.000000000000001  Thermosipho melanesiensis BI429  Bacteria  unclonable  0.00000389108  n/a   
 
 
-
 
NC_009457  VC0395_A1006  methyl-accepting chemotaxis protein  34.05 
 
 
411 aa  85.9  0.000000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0850  methyl-accepting chemotaxis protein  37.35 
 
 
721 aa  85.1  0.000000000000002  Treponema denticola ATCC 35405  Bacteria  unclonable  0.0000224033  n/a   
 
 
-
 
NC_011883  Ddes_1580  methyl-accepting chemotaxis sensory transducer  43.48 
 
 
686 aa  85.5  0.000000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  34.91 
 
 
628 aa  84.7  0.000000000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.57 
 
 
524 aa  85.1  0.000000000000002  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  35.56 
 
 
638 aa  85.1  0.000000000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_22670  methyl-accepting chemotaxis sensory transducer  34.72 
 
 
737 aa  85.5  0.000000000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2345  putative methyl-accepting chemotaxis sensory transducer  38.46 
 
 
666 aa  85.5  0.000000000000002  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.60686 
 
 
-
 
NC_011126  HY04AAS1_0569  methyl-accepting chemotaxis sensory transducer  53.01 
 
 
483 aa  85.1  0.000000000000002  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  29.57 
 
 
524 aa  85.1  0.000000000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3929  methyl-accepting chemotaxis protein  30.65 
 
 
505 aa  84.7  0.000000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0652  methyl-accepting chemotaxis sensory transducer  37.09 
 
 
520 aa  84.3  0.000000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0957566  hitchhiker  0.0000000067445 
 
 
-
 
NC_009438  Sputcn32_0925  methyl-accepting chemotaxis sensory transducer  34.44 
 
 
543 aa  84.7  0.000000000000003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1100  methyl-accepting chemotaxis sensory transducer  37.21 
 
 
465 aa  84.3  0.000000000000003  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0274031  n/a   
 
 
-
 
NC_008322  Shewmr7_0959  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
543 aa  84.3  0.000000000000003  Shewanella sp. MR-7  Bacteria  normal  0.656726  normal  0.666936 
 
 
-
 
NC_008322  Shewmr7_1877  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
378 aa  84.7  0.000000000000003  Shewanella sp. MR-7  Bacteria  normal  0.410986  normal  0.95878 
 
 
-
 
NC_010003  Pmob_1507  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
762 aa  84.3  0.000000000000003  Petrotoga mobilis SJ95  Bacteria  normal  0.463366  n/a   
 
 
-
 
NC_009439  Pmen_4122  methyl-accepting chemotaxis sensory transducer  47.06 
 
 
676 aa  84.3  0.000000000000003  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009715  CCV52592_2035  putative transducer  47.12 
 
 
626 aa  84.7  0.000000000000003  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2097  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
378 aa  84  0.000000000000004  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_1305  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
695 aa  84  0.000000000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.0484461 
 
 
-
 
NC_011898  Ccel_0221  methyl-accepting chemotaxis sensory transducer  40.13 
 
 
561 aa  83.6  0.000000000000005  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1054  methyl-accepting chemotaxis protein  30.43 
 
 
692 aa  84  0.000000000000005  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.00043245  n/a   
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
543 aa  83.6  0.000000000000005  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  26.98 
 
 
534 aa  83.6  0.000000000000005  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3579  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
543 aa  83.6  0.000000000000005  Shewanella baltica OS195  Bacteria  normal  normal  0.0986947 
 
 
-
 
NC_008577  Shewana3_0923  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
543 aa  83.6  0.000000000000005  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
543 aa  83.6  0.000000000000005  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_009052  Sbal_0908  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
543 aa  83.6  0.000000000000005  Shewanella baltica OS155  Bacteria  normal  0.073872  n/a   
 
 
-
 
NC_012793  GWCH70_0714  methyl-accepting chemotaxis sensory transducer  56.58 
 
 
550 aa  83.6  0.000000000000006  Geobacillus sp. WCH70  Bacteria  normal  0.0613025  n/a   
 
 
-
 
NC_009616  Tmel_0416  methyl-accepting chemotaxis sensory transducer  33.18 
 
 
597 aa  83.6  0.000000000000006  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0924  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
543 aa  83.6  0.000000000000006  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0624  methyl-accepting chemotaxis sensory transducer  57.69 
 
 
577 aa  83.2  0.000000000000006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0818  chemotaxis sensory transducer  45.71 
 
 
590 aa  83.2  0.000000000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_03020  methyl-accepting chemotaxis sensory transducer  33.77 
 
 
693 aa  83.2  0.000000000000007  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001528  putative chemotaxis transducer  41.67 
 
 
437 aa  83.2  0.000000000000007  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.3 
 
 
527 aa  83.2  0.000000000000007  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2159  methyl-accepting chemotaxis sensory transducer  30 
 
 
414 aa  83.2  0.000000000000007  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  33.33 
 
 
533 aa  82.8  0.000000000000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_011883  Ddes_0301  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.16 
 
 
735 aa  82.8  0.000000000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3950  methyl-accepting chemotaxis transducer  31.86 
 
 
725 aa  82.8  0.000000000000009  Pseudomonas putida KT2440  Bacteria  normal  normal  0.691578 
 
 
-
 
NC_009616  Tmel_1776  methyl-accepting chemotaxis sensory transducer  47.62 
 
 
664 aa  82.8  0.000000000000009  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1120  methyl-accepting chemotaxis sensory transducer  47.62 
 
 
664 aa  82.8  0.000000000000009  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00177625  n/a   
 
 
-
 
NC_012918  GM21_1359  methyl-accepting chemotaxis sensory transducer  37.27 
 
 
524 aa  82.8  0.000000000000009  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.05372e-22 
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  30.18 
 
 
518 aa  82.8  0.000000000000009  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  26.63 
 
 
521 aa  82.4  0.00000000000001  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1872  methyl-accepting chemotaxis sensory transducer  31.86 
 
 
721 aa  82.8  0.00000000000001  Pseudomonas putida F1  Bacteria  normal  normal  0.163736 
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  28.34 
 
 
524 aa  82.4  0.00000000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  32.8 
 
 
623 aa  82.4  0.00000000000001  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  29.18 
 
 
524 aa  82.8  0.00000000000001  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2883  chemotaxis sensory transducer  37.75 
 
 
537 aa  82.4  0.00000000000001  Dechloromonas aromatica RCB  Bacteria  hitchhiker  7.44547e-18  normal 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  33.72 
 
 
628 aa  82.8  0.00000000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_2237  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
631 aa  82.4  0.00000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  38.93 
 
 
658 aa  82.4  0.00000000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_009654  Mmwyl1_0686  methyl-accepting chemotaxis sensory transducer  32.87 
 
 
551 aa  82  0.00000000000001  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_2151  putative methyl-accepting chemotaxis sensory transducer  38.75 
 
 
656 aa  82.4  0.00000000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2222  methyl-accepting chemotaxis sensory transducer  31.18 
 
 
378 aa  82  0.00000000000001  Shewanella sp. ANA-3  Bacteria  normal  0.894674  normal 
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  29.18 
 
 
524 aa  82.4  0.00000000000001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
541 aa  81.6  0.00000000000002  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  36.36 
 
 
511 aa  82  0.00000000000002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  33.73 
 
 
628 aa  81.6  0.00000000000002  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  37.41 
 
 
541 aa  82  0.00000000000002  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
554 aa  81.6  0.00000000000002  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3156  methyl-accepting chemotaxis sensory transducer  31.98 
 
 
416 aa  82  0.00000000000002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.0000160053  n/a   
 
 
-
 
NC_011146  Gbem_0257  methyl-accepting chemotaxis sensory transducer  31.43 
 
 
393 aa  82  0.00000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
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