More than 300 homologs were found in PanDaTox collection
for query gene Pmen_4122 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_4122  methyl-accepting chemotaxis sensory transducer  100 
 
 
676 aa  1326    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1066  methyl-accepting chemotaxis protein  46.72 
 
 
685 aa  527  1e-148  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.395137  n/a   
 
 
-
 
NC_007005  Psyr_0913  histidine kinase, HAMP region: chemotaxis sensory transducer  45.92 
 
 
685 aa  504  1e-141  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.724419  normal 
 
 
-
 
NC_007492  Pfl01_4758  chemotaxis sensory transducer  47.59 
 
 
685 aa  479  1e-134  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0781085  normal  0.27831 
 
 
-
 
NC_004578  PSPTO_5554  methyl-accepting chemotaxis protein  29.39 
 
 
676 aa  213  9e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5093  histidine kinase, HAMP region: chemotaxis sensory transducer  29.22 
 
 
676 aa  202  1.9999999999999998e-50  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  31.55 
 
 
638 aa  200  7.999999999999999e-50  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  33.78 
 
 
549 aa  199  1.0000000000000001e-49  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  27.34 
 
 
666 aa  196  8.000000000000001e-49  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  34.31 
 
 
541 aa  196  2e-48  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2834  histidine kinase, HAMP region: chemotaxis sensory transducer  27.5 
 
 
671 aa  195  3e-48  Dechloromonas aromatica RCB  Bacteria  normal  0.188903  normal 
 
 
-
 
NC_007492  Pfl01_0789  chemotaxis sensory transducer  30.04 
 
 
676 aa  194  5e-48  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.377611  normal  0.0840542 
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  36.54 
 
 
544 aa  194  5e-48  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  39.75 
 
 
637 aa  193  7e-48  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  32.58 
 
 
550 aa  193  8e-48  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  35.29 
 
 
549 aa  192  1e-47  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
547 aa  192  2e-47  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  36.69 
 
 
541 aa  192  2e-47  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_010501  PputW619_4403  methyl-accepting chemotaxis sensory transducer  30.85 
 
 
670 aa  192  2.9999999999999997e-47  Pseudomonas putida W619  Bacteria  normal  0.604884  normal 
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  33.51 
 
 
543 aa  191  4e-47  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0529  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
544 aa  191  4e-47  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  29.58 
 
 
679 aa  188  3e-46  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  38.82 
 
 
636 aa  188  4e-46  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  35 
 
 
536 aa  186  1.0000000000000001e-45  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  37.08 
 
 
568 aa  186  1.0000000000000001e-45  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0956  methyl-accepting chemotaxis sensory transducer  27.09 
 
 
676 aa  186  1.0000000000000001e-45  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.82 
 
 
626 aa  186  1.0000000000000001e-45  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
542 aa  184  5.0000000000000004e-45  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  36.81 
 
 
541 aa  184  6e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  35.14 
 
 
596 aa  183  8.000000000000001e-45  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_009656  PSPA7_5137  putative chemotaxis transducer  30.52 
 
 
673 aa  183  8.000000000000001e-45  Pseudomonas aeruginosa PA7  Bacteria  normal  0.459514  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  37.46 
 
 
541 aa  183  8.000000000000001e-45  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  35.61 
 
 
637 aa  183  9.000000000000001e-45  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  33.68 
 
 
541 aa  183  1e-44  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  36.33 
 
 
628 aa  183  1e-44  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_009831  Ssed_1498  methyl-accepting chemotaxis sensory transducer  34.81 
 
 
687 aa  182  2e-44  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000111484  normal 
 
 
-
 
NC_010814  Glov_3312  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
533 aa  182  2e-44  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  35.61 
 
 
773 aa  182  2e-44  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
716 aa  182  2e-44  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  35.94 
 
 
630 aa  182  2e-44  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
543 aa  181  2.9999999999999997e-44  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
540 aa  182  2.9999999999999997e-44  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
540 aa  181  2.9999999999999997e-44  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.25 
 
 
630 aa  181  2.9999999999999997e-44  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  36.25 
 
 
630 aa  181  4e-44  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3876  methyl-accepting chemotaxis sensory transducer  36.2 
 
 
535 aa  181  4e-44  Geobacter bemidjiensis Bem  Bacteria  normal  0.74566  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  36.25 
 
 
630 aa  181  4e-44  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  36.25 
 
 
630 aa  181  4e-44  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  38.85 
 
 
545 aa  181  4e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
547 aa  181  4.999999999999999e-44  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU2942  methyl-accepting chemotaxis protein  35.78 
 
 
544 aa  180  5.999999999999999e-44  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  34.77 
 
 
547 aa  180  5.999999999999999e-44  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_012918  GM21_3964  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
535 aa  181  5.999999999999999e-44  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000408371 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  35.31 
 
 
630 aa  180  7e-44  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  34.99 
 
 
628 aa  180  8e-44  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  35.23 
 
 
558 aa  180  8e-44  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.86 
 
 
626 aa  179  1e-43  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3345  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
542 aa  179  2e-43  Geobacter sp. M21  Bacteria  n/a    normal  0.0226154 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  37.32 
 
 
621 aa  178  2e-43  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
540 aa  178  3e-43  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  35.62 
 
 
630 aa  178  3e-43  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
554 aa  178  3e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  32.76 
 
 
533 aa  177  4e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0767  putative methyl-accepting chemotaxis sensory transducer  33.81 
 
 
546 aa  178  4e-43  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  36.54 
 
 
544 aa  178  4e-43  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_009457  VC0395_A0931  methyl-accepting chemotaxis protein  29.94 
 
 
543 aa  177  6e-43  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  33.51 
 
 
573 aa  177  6e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  35.62 
 
 
630 aa  177  6e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  31.59 
 
 
630 aa  177  6e-43  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
540 aa  177  6e-43  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
630 aa  177  6e-43  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
554 aa  177  6e-43  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  34.1 
 
 
628 aa  177  7e-43  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  29.09 
 
 
631 aa  177  7e-43  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
572 aa  176  9e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  34.37 
 
 
549 aa  176  9.999999999999999e-43  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  34.79 
 
 
545 aa  176  9.999999999999999e-43  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  36.36 
 
 
533 aa  175  1.9999999999999998e-42  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
564 aa  176  1.9999999999999998e-42  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  36.88 
 
 
541 aa  176  1.9999999999999998e-42  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  36.56 
 
 
624 aa  175  1.9999999999999998e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  34.39 
 
 
552 aa  176  1.9999999999999998e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  38.91 
 
 
541 aa  174  2.9999999999999996e-42  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
547 aa  175  2.9999999999999996e-42  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  34.56 
 
 
626 aa  174  2.9999999999999996e-42  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  34.56 
 
 
425 aa  174  3.9999999999999995e-42  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  34.12 
 
 
712 aa  174  3.9999999999999995e-42  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
554 aa  174  3.9999999999999995e-42  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
554 aa  174  5e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  33.41 
 
 
521 aa  174  5e-42  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
554 aa  174  5.999999999999999e-42  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  35.19 
 
 
550 aa  174  6.999999999999999e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  37.61 
 
 
554 aa  174  6.999999999999999e-42  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  34.78 
 
 
554 aa  173  7.999999999999999e-42  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  34.59 
 
 
712 aa  173  7.999999999999999e-42  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
554 aa  173  7.999999999999999e-42  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  33.86 
 
 
541 aa  173  9e-42  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  35.4 
 
 
554 aa  173  9e-42  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1021  methyl-accepting chemotaxis sensory transducer  35.05 
 
 
518 aa  173  1e-41  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
568 aa  172  1e-41  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
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