More than 300 homologs were found in PanDaTox collection
for query gene Psyr_0913 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_1066  methyl-accepting chemotaxis protein  93.28 
 
 
685 aa  1269    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.395137  n/a   
 
 
-
 
NC_007005  Psyr_0913  histidine kinase, HAMP region: chemotaxis sensory transducer  100 
 
 
685 aa  1370    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.724419  normal 
 
 
-
 
NC_007492  Pfl01_4758  chemotaxis sensory transducer  69.44 
 
 
685 aa  842    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0781085  normal  0.27831 
 
 
-
 
NC_009439  Pmen_4122  methyl-accepting chemotaxis sensory transducer  45.92 
 
 
676 aa  491  1e-137  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  26.75 
 
 
666 aa  207  7e-52  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  36.01 
 
 
621 aa  189  1e-46  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_010501  PputW619_4403  methyl-accepting chemotaxis sensory transducer  28.08 
 
 
670 aa  187  5e-46  Pseudomonas putida W619  Bacteria  normal  0.604884  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
541 aa  184  5.0000000000000004e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  35.14 
 
 
628 aa  183  1e-44  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  33.33 
 
 
628 aa  182  2e-44  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  35.54 
 
 
554 aa  181  4.999999999999999e-44  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  33.8 
 
 
533 aa  181  4.999999999999999e-44  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  35.08 
 
 
554 aa  181  5.999999999999999e-44  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3553  methyl-accepting chemotaxis sensory transducer  34.47 
 
 
667 aa  179  2e-43  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3356  methyl-accepting chemotaxis sensory transducer  34.47 
 
 
667 aa  178  2e-43  Shewanella baltica OS223  Bacteria  normal  0.386472  normal 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  35.58 
 
 
628 aa  178  3e-43  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
554 aa  178  3e-43  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  36.33 
 
 
533 aa  178  3e-43  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  33.43 
 
 
639 aa  177  4e-43  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3428  methyl-accepting chemotaxis sensory transducer  34.47 
 
 
667 aa  177  4e-43  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
554 aa  177  5e-43  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0934  methyl-accepting chemotaxis sensory transducer  34.47 
 
 
667 aa  177  5e-43  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.22 
 
 
554 aa  177  5e-43  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
554 aa  177  6e-43  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
541 aa  177  8e-43  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
554 aa  176  9.999999999999999e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  35.76 
 
 
554 aa  175  1.9999999999999998e-42  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
541 aa  175  1.9999999999999998e-42  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  33.96 
 
 
773 aa  174  3.9999999999999995e-42  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  34.17 
 
 
554 aa  174  3.9999999999999995e-42  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0210  methyl-accepting chemotaxis protein  34.8 
 
 
543 aa  174  5e-42  Vibrio cholerae O395  Bacteria  decreased coverage  0.000000000000824359  n/a   
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  36.52 
 
 
542 aa  174  5e-42  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
631 aa  174  5.999999999999999e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
630 aa  174  5.999999999999999e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
555 aa  173  7.999999999999999e-42  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_009656  PSPA7_5137  putative chemotaxis transducer  28.43 
 
 
673 aa  173  1e-41  Pseudomonas aeruginosa PA7  Bacteria  normal  0.459514  n/a   
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  31.92 
 
 
533 aa  172  1e-41  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.92 
 
 
533 aa  172  1e-41  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_008228  Patl_0068  methyl-accepting chemotaxis sensory transducer  26.1 
 
 
648 aa  172  1e-41  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  33.89 
 
 
554 aa  173  1e-41  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
549 aa  172  2e-41  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  36.25 
 
 
620 aa  172  2e-41  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  35.89 
 
 
548 aa  172  2e-41  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  32.28 
 
 
558 aa  172  2e-41  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
638 aa  172  2e-41  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  34.7 
 
 
620 aa  172  2e-41  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  35.44 
 
 
554 aa  171  3e-41  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
540 aa  171  4e-41  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  34.22 
 
 
637 aa  171  5e-41  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
554 aa  170  7e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
554 aa  170  8e-41  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  33.8 
 
 
578 aa  169  1e-40  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  35.03 
 
 
541 aa  170  1e-40  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  33.61 
 
 
541 aa  169  1e-40  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_58650  putative chemotaxis transducer  29.23 
 
 
673 aa  170  1e-40  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  34.66 
 
 
549 aa  168  2e-40  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  33.66 
 
 
541 aa  169  2e-40  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_008321  Shewmr4_0946  methyl-accepting chemotaxis sensory transducer  35.58 
 
 
667 aa  169  2e-40  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0724  methyl-accepting chemotaxis sensory transducer  30.8 
 
 
539 aa  168  2e-40  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0950  methyl-accepting chemotaxis sensory transducer  35.9 
 
 
667 aa  168  2.9999999999999998e-40  Shewanella putrefaciens CN-32  Bacteria  normal  0.231949  n/a   
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
620 aa  168  2.9999999999999998e-40  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3605  methyl-accepting chemotaxis sensory transducer  36.47 
 
 
666 aa  168  2.9999999999999998e-40  Shewanella woodyi ATCC 51908  Bacteria  normal  0.644417  normal 
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  33.42 
 
 
497 aa  168  2.9999999999999998e-40  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0984  methyl-accepting chemotaxis sensory transducer  35.58 
 
 
667 aa  168  2.9999999999999998e-40  Shewanella sp. MR-7  Bacteria  normal  normal  0.869835 
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
620 aa  168  2.9999999999999998e-40  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
620 aa  168  4e-40  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  32 
 
 
642 aa  168  4e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_008577  Shewana3_0948  methyl-accepting chemotaxis sensory transducer  35.58 
 
 
667 aa  167  4e-40  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0789  chemotaxis sensory transducer  27.44 
 
 
676 aa  167  6.9999999999999995e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.377611  normal  0.0840542 
 
 
-
 
NC_011146  Gbem_0809  methyl-accepting chemotaxis sensory transducer  35.35 
 
 
532 aa  167  6.9999999999999995e-40  Geobacter bemidjiensis Bem  Bacteria  normal  0.826751  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  36.09 
 
 
552 aa  167  6.9999999999999995e-40  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  36.09 
 
 
552 aa  167  6.9999999999999995e-40  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  33.42 
 
 
620 aa  167  6.9999999999999995e-40  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  36.04 
 
 
662 aa  167  8e-40  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.34 
 
 
554 aa  167  8e-40  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  38.28 
 
 
541 aa  167  9e-40  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
620 aa  167  9e-40  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
620 aa  167  9e-40  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  35.31 
 
 
539 aa  166  1.0000000000000001e-39  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1498  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
687 aa  166  1.0000000000000001e-39  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000111484  normal 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  34.08 
 
 
544 aa  166  1.0000000000000001e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  31.07 
 
 
536 aa  166  1.0000000000000001e-39  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
568 aa  166  1.0000000000000001e-39  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3322  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
539 aa  166  1.0000000000000001e-39  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.910778 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  37.26 
 
 
620 aa  166  1.0000000000000001e-39  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
554 aa  166  1.0000000000000001e-39  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  32.1 
 
 
540 aa  166  1.0000000000000001e-39  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  32.71 
 
 
554 aa  166  1.0000000000000001e-39  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2502  putative methyl-accepting chemotaxis sensory transducer  31.96 
 
 
649 aa  166  2.0000000000000002e-39  Shewanella amazonensis SB2B  Bacteria  normal  0.988754  normal 
 
 
-
 
NC_009654  Mmwyl1_3323  methyl-accepting chemotaxis sensory transducer  34.53 
 
 
539 aa  165  2.0000000000000002e-39  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  36.24 
 
 
716 aa  165  2.0000000000000002e-39  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  28.12 
 
 
679 aa  165  2.0000000000000002e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  38.46 
 
 
637 aa  166  2.0000000000000002e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  30.59 
 
 
638 aa  166  2.0000000000000002e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  32.03 
 
 
547 aa  165  2.0000000000000002e-39  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
554 aa  165  3e-39  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
554 aa  165  3e-39  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
554 aa  164  4.0000000000000004e-39  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  34.04 
 
 
568 aa  164  4.0000000000000004e-39  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
664 aa  164  4.0000000000000004e-39  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
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