Gene Dhaf_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0624 
Symbol 
ID7257591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp685971 
End bp687704 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content54% 
IMG OID643560542 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002457126 
Protein GI219666691 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATGGT TTATTAATTT AAAAACAAGT AGAAAACTCT TGATCTGCTT TTTACTAATG 
GCCCTATTAA TCCTGACTGT TGGCATCACC GGGCTGCTTA ACCTGGGCAA AGTCAACGCT
AATATTAAAA TAATCACCCA GGACGGCATC CAGCCCATTC TCATTTTAGA AGACTTGAAT
AAGAGCTTTG CTAAAGGAGC CGCGGAGTTG ACCGGCGTGG TCTGGAAAAG CCAGGTTGCA
GAAGACTCTG CAGTGGTCGG CGATTCCCGC CGGGTGATTG CCCAGGCTAT CGAAGACGGC
GACCTGCTGC TCCAGCAGTA CCAAATGCTC AACTTGACCG ACGAAGAAAA AGAACTGTTA
GGGGAATTCA AACGTGAGGA GGCCGTTTAC CGCGACTTGC GGGAAAAGGC GCTGACCGCC
GTTGCATTAA AAAGCTATGC CTTAGCCGGT GACTTCAACC AGCAGGCCGG TCTGCAGCAG
GCTAAGGTGG AAGGAATCAT CGATCAGATG ATTGAGTGTT CCCTGGCCTA TAACGAGGAG
CTTCAGCGCG CCTCGGAACA GGACTTTGCC AAAGCCGGCA TGGTCATTAT GATCCTGACC
GCCTGCGGTT TTGGTTTGGC TTTGTTATTC AGTCTGCTCC TGGGGAGAAT GATCAGCCGC
CCGATTCTGG CCGCCGTTGA ACAGGCTGAA TTATTTGCCC AAGGGGATTT TTCCACGGAT
CAGCAAAGAG CTTTCCTGGG CAGGAAGGAC GAAATCGGTC AATTAGCCCA GGCCTATGAT
GAGATCGACA GCAATATGAG CCGCCTTCTG GAACAGGTGA TGGCGGCTGC CGAAGATCTT
AAGACAGTGG GAGGGGAACT ATCGGTGTCG GCTGAGGAAC TGAATGCCCA GGGACAAAAC
ATCAATGCCG GAGCGGAACA GATTGCGGCA GGGATGGAAG AGACGGCAGC CTCTGCCCAA
GAAATGCTGG CTTCCGGAAC GGAGATCAGC AACGGGGCCG GCAGGCTGGC CGGGAAAGCC
GCTGAGGGCA GCAGAATCGT CCAGGACATC GAGCAGAAAG CCCAGCTGAT GCGTACCAAT
GCTGAAGCAT CACGGGGTGC AACCCTGAGC ATGTACCAGC ACAAACAAGC AGAAATCATC
GCCGCCATCC AAAACGGTGA AGTGGTTCAA GAAATCAGGA TCATGGCCGA AACCATCGAC
GGCATCGCCG GGCAGACCAA TCTCCTGGCC TTGAACGCCG CTATCGAAGC AGCCCGGGCC
GGAGAGCAGG GAAGGGGCTT TGCCGTAGTC GCCGAAGAAG TGCGGAAGCT GGCCGAACAA
TCGGCCCAGA CCGTAGCGGG AATCCATGCC GTGATCAGCA AAGTCACCGA AGCCTTTGGC
CAGCTCTCCC GCAACTCCTC CGACGTATTA ACCTTTATGG AGGAAAAAGT CATACCCGAT
TACGAGAGCC TTGTAGAAGC AGAAGAACAG CATGCCCAGG ATGCCCGGCG GATAGGAACC
CTGGTGGAAG ACTTCGCCGC CACATCAGAG CAAATGCTGG CCGCCATCGA GCAAATGAGC
AACGCCATCC AAACCGTTTC CGCTTCAGTC CAGGAAAGCA CCGGCAGTTC CCAGGAAATC
GCCCACAATA TGAGCCAGAT GGCCGGGGTT ATGGAGCAGG TGGCCAAGGC CGCTCAGAGC
CAGGCTGAAC ATGCGATGGA CTTGAATGCT ATGGTGGAGA AGTTCAAAAT CTGA
 
Protein sequence
MGWFINLKTS RKLLICFLLM ALLILTVGIT GLLNLGKVNA NIKIITQDGI QPILILEDLN 
KSFAKGAAEL TGVVWKSQVA EDSAVVGDSR RVIAQAIEDG DLLLQQYQML NLTDEEKELL
GEFKREEAVY RDLREKALTA VALKSYALAG DFNQQAGLQQ AKVEGIIDQM IECSLAYNEE
LQRASEQDFA KAGMVIMILT ACGFGLALLF SLLLGRMISR PILAAVEQAE LFAQGDFSTD
QQRAFLGRKD EIGQLAQAYD EIDSNMSRLL EQVMAAAEDL KTVGGELSVS AEELNAQGQN
INAGAEQIAA GMEETAASAQ EMLASGTEIS NGAGRLAGKA AEGSRIVQDI EQKAQLMRTN
AEASRGATLS MYQHKQAEII AAIQNGEVVQ EIRIMAETID GIAGQTNLLA LNAAIEAARA
GEQGRGFAVV AEEVRKLAEQ SAQTVAGIHA VISKVTEAFG QLSRNSSDVL TFMEEKVIPD
YESLVEAEEQ HAQDARRIGT LVEDFAATSE QMLAAIEQMS NAIQTVSASV QESTGSSQEI
AHNMSQMAGV MEQVAKAAQS QAEHAMDLNA MVEKFKI