Gene Psyr_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0789 
Symbol 
ID3366276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp895430 
End bp896647 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content62% 
IMG OID637651127 
Productchemotaxis sensory transducer 
Protein accessionYP_233885 
Protein GI66044044 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCGA ATCAATACAG TAGTGCTCCT GCAGAAAATC ATCCGCGTTT CATCTGGTTC 
TCACTCATTC CCGTCATACC CGCCATTGCC TGGATTCTCA CGCAGTTCGG CACGGGTACG
GCCAATCTGG TGGCGTGTGC TGCACTGCTG GCGATCGGTC TCGGCGCCTG TGCCTTGGCC
GCCCGCTCCC AACAGACCCA AGTGCGCCGC GCCGTGGCTC AGGCGCTGGA TCACCACCAG
GCGCATAGCG CTCAAAGCAG CGCAATGGCG TCCAATGTCC AGTTCAATGA AATCCTCCTC
GGTGCCATGC CGATCTGGGC CAAGCAGGTC GAGAGCTCGC GCCAGCAGAC CGAAACCGCG
ATTGTCGAAT TGAGCACGCG TTTCATGGGC ATTTCCGAGC GCCTGCAGGA AACCGTGCAG
GCGTCGCAGC ACGCTGCCGG TGAGCTGGAC GGTCAGAATG CCGATGGTGC GCTGAAAGTG
TTGTCGCAAA GCGACAGCGA ACTAAGCCGG GTAATCGACT CGCTCAAATC CACTCAGGCC
AGCCGCGACC AGACGCTCTC CCAGGTGCGC AGCCTCACCG CCTACACCGG CGAATTGCGC
ACCATGGCCG CCGACGTTGC GGCGATTGCC GCACAGACCA ACCTGCTGGC CCTCAACGCG
GCCATCGAGG CGGCGCGTGC CGGTGAAGCG GGTCGCGGCT TTGCCGTGGT GGCCGACGCG
GTGCGCAGCC TGTCGAGCAA GTCCAGCGAA ACCGGTCAGC AGATGTCCGC CAAGGTCGAC
ATCATCAACA ACGCCATCAC CCAGCTGGTG CAGGCCGCAT CGAGCGGTGC CGATCAGGAC
AGCCATTCGG TGGCCGCTTC CGAACAAAGC ATTCAGAACG TACTGGAGCG CTTCCAGAGC
ATCACCGGTC GTCTGGCCGA GTCCGCCGAC CTGCTCAAGC AGGAGAGCTA CGGGATTCGC
GACGAAATGA CCGAGGTCCT GGTGAACCTG CAGTTTCAGG ACCGGGTCAG CCAGATTCTC
GCCCACGTAC GCGACAACAT CGACTCGTTG CATGCACACC TTCTGCAGGC TAGCCAGTCC
CCCGACGAGG CCGTCGCCAT CGACGCCCGG CAATGGTTGG CGCGCATGGA GTCTACCTAC
GCGACCGACG AGCAACGTCG CACTCACCGA GGTGAATCGG CAGCACAGCA GGATTCGCAG
GAAATCACGT TTTTCTAG
 
Protein sequence
MMSNQYSSAP AENHPRFIWF SLIPVIPAIA WILTQFGTGT ANLVACAALL AIGLGACALA 
ARSQQTQVRR AVAQALDHHQ AHSAQSSAMA SNVQFNEILL GAMPIWAKQV ESSRQQTETA
IVELSTRFMG ISERLQETVQ ASQHAAGELD GQNADGALKV LSQSDSELSR VIDSLKSTQA
SRDQTLSQVR SLTAYTGELR TMAADVAAIA AQTNLLALNA AIEAARAGEA GRGFAVVADA
VRSLSSKSSE TGQQMSAKVD IINNAITQLV QAASSGADQD SHSVAASEQS IQNVLERFQS
ITGRLAESAD LLKQESYGIR DEMTEVLVNL QFQDRVSQIL AHVRDNIDSL HAHLLQASQS
PDEAVAIDAR QWLARMESTY ATDEQRRTHR GESAAQQDSQ EITFF