| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2587 |
|---|
| Symbol | |
|---|
| ID | 8086977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 3034690 |
|---|
| End bp | 3036342 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644836657 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002988186 |
|---|
| Protein GI | 242240005 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.83115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTA CGCAACGCCT GCTATTAACG TTTTCGCTGT TATCTCTGGC GCTCATTGCA
CTGGTGATGA TTACACTGTC GCTCTTATCC GGTTTCCAGT CTCGCGCCGA ATATGTGCAG
GATAATGCTG TAGGCAGTAT CAAGGATCTG AACACCGTCG TTGATAAAAG TAACACCCTG
GTGCTTCTGC TCTATCGCTA CCAAACCACG CCGGACGACA GTAAGTTGCC CGATATTGAG
CAACGCATAA ACCAAACTAT CGAGGATATT AAATCGCTCA ATAGCGACTA TATGAAGAAC
AGTATCTCTA GCGAGGAGGA TAAAAACCTG ACTTTAGTGG CCATAGACAA TGTCAAAAAC
TTGCAGTCGA CATTGCCCGC TTTTCTGGCT GCCGCTAAAG CCAATCAGGA TGAGATCTCG
CTCAATATGC TGCAAGGCAC CGGCGGTGTA GGTGAGGCCG TGCGTAACAT GCTCAGCACC
TACCGCAAGC AGTTCGATTT GAATGTCAAA ATCGGCGATG ACCTGAGCCA GACCAATACA
CGGATCTACC ACCAGAGCTG GATTAGCCTG TTAAGCGGTG CGCTATTAGC CATACTACTG
ACCAGCATCC TGGCGGTAAG AACGATCCTG GGTATTCGAA AAAGTCTGAG CAACATGAGC
CACGTCATGG AGAGCGCCAG TACAACCCTG GATCTGACGC TCAAAGCGAA CGACCAGCGC
AAGGATGAGA TCGGTATCAC TGCCCAGGCG TTTAACTCAC TGATGCAGCG TGTCGCCACT
ACCCTGGCCT CCGTCAGCGC CTCTGCACAA TCGGTTAGCA GCGCAGCAAC GCAAATCGCC
GCCGGTAATG AAGACTTGTC TTCCCGTACT GAGCAACAGG CCGCATCGCT GGAAGAAACC
GCCGCCAGCA TGACGGAAAT CAGCGAAACG GTACGCCAGA ATGCGGAGAA CACCCAGCAA
GCCAGTATAT TGGCAGGCAA TGCCAGCCAG ATATCGGTCA GTAGCGCCGA CTCGGTTACG
ACGATGCTGG ATACCATGGA TAAGATCCGT ACCAGCGGCA GTAAAATCAC CGACATTATC
GCGCTGATTG AAGGCATCGC GTTTCAAACC AATATCCTGG CATTGAACGC CGCCGTCGAA
GCCGCACGCG CAGGGGAACA AGGGCGTGGG TTCGCCGTCG TCGCCGGGGA AGTTCGCACG
CTGGCGCAGC GCTCCTCCAC GGCCGCGCGT GAAATCAAAG ATTTGATCGA TACCTCCAAT
GCGTTGATCC TGACCGGCGC CGAACAGGCT GGCGATGTCG GCAAAAAGAT GTCGGCCATG
AAAGATGCGA TTCAACAAGT CTCTGACCTG ATGAGTGAAA TCTCCGCCGC GACCGAAGAG
CAAAGCAAGG GAATCAACCA GGTTCATCAG GCGGTTAATC AGATGGATGA TGTGACTCAA
CAGAACGCCT CATTGGTAGA AGAAGCCTCT GCCGCATCGC AATCCTTGCA AGAACAGGCA
ACGGTATTAA ACCAGTTGGT TGGGCAGTTT AGCGTCGGCC ATCATGCCGC GCCTGAGTTA
GCGGCGACCT CATCCACGCC GGTGCCGCGT CTTGTCTTGC CGACGAAAAA TCGTGCGGTA
ACGCCTAATG GAACGAGTTG GGAAAGTTTC TAA
|
|---|
| Protein sequence | MNITQRLLLT FSLLSLALIA LVMITLSLLS GFQSRAEYVQ DNAVGSIKDL NTVVDKSNTL
VLLLYRYQTT PDDSKLPDIE QRINQTIEDI KSLNSDYMKN SISSEEDKNL TLVAIDNVKN
LQSTLPAFLA AAKANQDEIS LNMLQGTGGV GEAVRNMLST YRKQFDLNVK IGDDLSQTNT
RIYHQSWISL LSGALLAILL TSILAVRTIL GIRKSLSNMS HVMESASTTL DLTLKANDQR
KDEIGITAQA FNSLMQRVAT TLASVSASAQ SVSSAATQIA AGNEDLSSRT EQQAASLEET
AASMTEISET VRQNAENTQQ ASILAGNASQ ISVSSADSVT TMLDTMDKIR TSGSKITDII
ALIEGIAFQT NILALNAAVE AARAGEQGRG FAVVAGEVRT LAQRSSTAAR EIKDLIDTSN
ALILTGAEQA GDVGKKMSAM KDAIQQVSDL MSEISAATEE QSKGINQVHQ AVNQMDDVTQ
QNASLVEEAS AASQSLQEQA TVLNQLVGQF SVGHHAAPEL AATSSTPVPR LVLPTKNRAV
TPNGTSWESF
|
|---|
| |