| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5305 |
|---|
| Symbol | |
|---|
| ID | 3715201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5970928 |
|---|
| End bp | 5972988 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | chemotaxis sensory transducer |
|---|
| Protein accession | YP_351033 |
|---|
| Protein GI | 77461526 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.115158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.281343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAG CAAAAACAGG CAAGCCCGCA GAAGGCTCGC GCAGCCGCTC GCAGATCATC
GTGCTGTTCA TCGCACTGAT CGTGTTCATC ATGCTGCTGT TCGCCAACTT CGCTTACCTC
AACACCCAGG CCAACTACGA CAAGCAGTAC ATCGGCCACG CCGGCGAGCT GCGGGTGCTG
TCGCAGCGGA TCGCCAAGAA CGCCACCGAA GCCGCCGCCG GCAAGGCTGC CGCGTTCAAG
CTGCTCAGCG ATGCGCGCAA CGATTTTGCC CAGCGCTGGG GCTACCTGAA GAAGGGCGAC
CCGGCCACCG GCCTGCCGCC GGCGCCGTCC GTCGTGCGCC CGGAAATGCG CGCCGTGCAG
CTGGACTGGG AACGCCTGCT GAAAAACACC GACGCGATTC TCTCCAGCGA ACAGACCGTG
CTGTCCCTGC ATCAGGTGGC CGCGACCCTG GCCGAAACCG TGCCGCAGTT GCAGATCGAA
TACGAAAAAG TCGTCGAGAT TCTCCTGCAA CGCGGTGCCC CGGCGGCGCA GGTGGCGATG
GCCCAGCGTC AGTCGCTGCT GGCCGAACGG ATTCTCGGTG CGGTGAACAC CGTGCTGTCG
GGCGATGAAA ACTCCCAGCA GGCCGCCGAC GCCTTCGGTC GCGATGCCGC GCGCTTCGGT
CAGGTGCTCA ATGGCATGTT GCAAGGCAAC CCGGCGCTGA AAGTCAGCCA GGTCGAAGAC
CGCGACGCCC GTGCGCGTCT GAGCGAGATT TCCGAGCTGT TCCAGTTCGT GTCCGGTTCG
GTGGATGAAA TCCTAGAAAC CTCGCCGGAG CTGTTCAAGG TTCGTGAGTC GGCCACCAAC
ATCTTCAGCC TGTCGCAGAC CCTGCTCGAC GAAGCCTCGC ACCTGGCCAG CCGTTTCGAA
AACCTGGCAG GCGGGCGCAG CACCGACACC ATCGGCGGTT ATGTGCTGGG CCTGCTGGCG
CTGGCCTCGA TCATTCTGAT CGGCATGGTC ATGGTCCGGG AAACCAACCG TCAACTGCGC
GAGACCGCCG AGAAAAACGA GCGCAACCAG AACGCGATCA TGCGCCTGCT CGACGAGATC
GAAGACCTCG CCGACGGCGA CCTGACCGTG ACTGCCTCGG TGACCGAAGA CTTCACCGGA
ACCATCGCCG ACTCGATCAA CTATTCAGTC GACCAGTTGC GCGATCTGGT CGCCACCATC
AACCTCACTG CCGGACAGGT CGCCGCTGCG GTGCAGGAAA CCCAGGCCAC CGCCATGCAC
CTGGCCCAAG CCTCGGAGCA TCAGGCCCAG CAGATTTCCG AAGCCTCGAC CGCGATCAGC
GACATGGCCC AATCCATCGA TCAGGTGTCG GCCAACGCCG CCGAATCCTC GGCAGTGGCC
GAGCGTTCGG TGGAGATCGC CAACAAGGGC AACGAGGTGG TGCACAACAC CATCCACGGT
ATGGACAACA TCCGCGAACA GATCCAGGAC ACCGCCAAGC GCATCAAGCG CCTGGGCGAG
TCGTCCCAGG AAATCGGCGA CATCGTCAGC CTGATCGATG ACATTGCCGA CCAGACCAAC
ATCCTCGCCC TCAACGCGGC GATTCAGGCG TCGATGGCCG GTGATGCCGG GCGCGGTTTC
GCGGTTGTGG CCGACGAAGT ACAGCGGCTG GCCGAGCGTT CGTCCGCCGC GACCCGGCAG
ATCGAGACGC TGGTGCGGGC GATCCAGACC GACACCAACG AAGCCGTGAT TTCCATGGAG
CAGACCACCA CCGAAGTGGT GCGCGGCGCG CGGCTGGCGC AGGATGCGGG TGTGGCCCTG
GAAGAAATCG AAGGCGTGTC CAAGACCCTC GCGGCGCTGA TCCAGAGCAT TTCCAACGCG
GCGCAGCAGC AGACGTCTTC GGCCGGGCAG ATTTCCCTGA CGATGAACGT GATCCAGCAG
ATCACCTCGC AGACCTCGTC CGGTTCCACG GCCACCGCCG AGAGCATCGG CAACCTGGCG
AAAATGGCCA GCCAGTTGCG TCGCTCGGTG TCCGGGTTCA CCTTGCCGAC GACGCCTGCG
CCCGTCGCGG ACAAGGCGTG A
|
|---|
| Protein sequence | MIKAKTGKPA EGSRSRSQII VLFIALIVFI MLLFANFAYL NTQANYDKQY IGHAGELRVL
SQRIAKNATE AAAGKAAAFK LLSDARNDFA QRWGYLKKGD PATGLPPAPS VVRPEMRAVQ
LDWERLLKNT DAILSSEQTV LSLHQVAATL AETVPQLQIE YEKVVEILLQ RGAPAAQVAM
AQRQSLLAER ILGAVNTVLS GDENSQQAAD AFGRDAARFG QVLNGMLQGN PALKVSQVED
RDARARLSEI SELFQFVSGS VDEILETSPE LFKVRESATN IFSLSQTLLD EASHLASRFE
NLAGGRSTDT IGGYVLGLLA LASIILIGMV MVRETNRQLR ETAEKNERNQ NAIMRLLDEI
EDLADGDLTV TASVTEDFTG TIADSINYSV DQLRDLVATI NLTAGQVAAA VQETQATAMH
LAQASEHQAQ QISEASTAIS DMAQSIDQVS ANAAESSAVA ERSVEIANKG NEVVHNTIHG
MDNIREQIQD TAKRIKRLGE SSQEIGDIVS LIDDIADQTN ILALNAAIQA SMAGDAGRGF
AVVADEVQRL AERSSAATRQ IETLVRAIQT DTNEAVISME QTTTEVVRGA RLAQDAGVAL
EEIEGVSKTL AALIQSISNA AQQQTSSAGQ ISLTMNVIQQ ITSQTSSGST ATAESIGNLA
KMASQLRRSV SGFTLPTTPA PVADKA
|
|---|
| |