More than 300 homologs were found in PanDaTox collection
for query gene Hoch_3254 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_3254  methyl-accepting chemotaxis sensory transducer  100 
 
 
612 aa  1201    Haliangium ochraceum DSM 14365  Bacteria  normal  0.0159313  normal  0.0166963 
 
 
-
 
NC_009523  RoseRS_1510  methyl-accepting chemotaxis sensory transducer  42.18 
 
 
751 aa  265  2e-69  Roseiflexus sp. RS-1  Bacteria  normal  0.795012  normal  0.0658131 
 
 
-
 
NC_009767  Rcas_3434  methyl-accepting chemotaxis sensory transducer  42.89 
 
 
750 aa  265  2e-69  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.364699  normal  0.15182 
 
 
-
 
NC_011146  Gbem_2028  methyl-accepting chemotaxis sensory transducer  37.61 
 
 
626 aa  263  4.999999999999999e-69  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2191  methyl-accepting chemotaxis sensory transducer  38.05 
 
 
618 aa  259  9e-68  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_3201  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
608 aa  249  1e-64  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.608915 
 
 
-
 
NC_009523  RoseRS_0999  methyl-accepting chemotaxis sensory transducer  34.35 
 
 
625 aa  247  6e-64  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2709  methyl-accepting chemotaxis sensory transducer  46.84 
 
 
537 aa  241  2e-62  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2464  methyl-accepting chemotaxis sensory transducer  34.5 
 
 
576 aa  234  5e-60  Polaromonas sp. JS666  Bacteria  normal  0.681434  normal  0.078155 
 
 
-
 
NC_007948  Bpro_2463  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
512 aa  221  3e-56  Polaromonas sp. JS666  Bacteria  normal  0.735637  normal  0.0793518 
 
 
-
 
NC_007614  Nmul_A0332  methyl-accepting chemotaxis sensory transducer  45.49 
 
 
497 aa  211  3e-53  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0990  methyl-accepting chemotaxis sensory transducer  36.46 
 
 
824 aa  208  2e-52  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.256608 
 
 
-
 
NC_009621  Smed_5117  methyl-accepting chemotaxis sensory transducer  42.42 
 
 
545 aa  204  3e-51  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0275586 
 
 
-
 
NC_011145  AnaeK_2677  methyl-accepting chemotaxis sensory transducer  41.77 
 
 
547 aa  202  1.9999999999999998e-50  Anaeromyxobacter sp. K  Bacteria  normal  0.0498227  n/a   
 
 
-
 
NC_011891  A2cp1_2772  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
547 aa  201  1.9999999999999998e-50  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0543063  n/a   
 
 
-
 
NC_011832  Mpal_1328  methyl-accepting chemotaxis sensory transducer  36.23 
 
 
543 aa  202  1.9999999999999998e-50  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_008576  Mmc1_1833  methyl-accepting chemotaxis sensory transducer  38.58 
 
 
515 aa  202  1.9999999999999998e-50  Magnetococcus sp. MC-1  Bacteria  normal  0.239593  normal 
 
 
-
 
NC_007796  Mhun_0495  methyl-accepting chemotaxis sensory transducer  35.56 
 
 
795 aa  200  6e-50  Methanospirillum hungatei JF-1  Archaea  normal  0.132321  normal 
 
 
-
 
NC_007760  Adeh_1194  methyl-accepting chemotaxis sensory transducer  41.46 
 
 
547 aa  199  1.0000000000000001e-49  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.705182  n/a   
 
 
-
 
NC_008578  Acel_1872  methyl-accepting chemotaxis sensory transducer  36.15 
 
 
555 aa  198  3e-49  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2296  methyl-accepting chemotaxis sensory transducer  39.75 
 
 
544 aa  196  9e-49  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.786349  normal 
 
 
-
 
NC_007948  Bpro_2465  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
555 aa  196  1e-48  Polaromonas sp. JS666  Bacteria  normal  0.834372  normal  0.0349736 
 
 
-
 
NC_009051  Memar_0239  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
793 aa  191  2.9999999999999997e-47  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011894  Mnod_5452  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
558 aa  186  8e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.397203  n/a   
 
 
-
 
NC_010511  M446_0243  methyl-accepting chemotaxis sensory transducer  41.69 
 
 
561 aa  186  1.0000000000000001e-45  Methylobacterium sp. 4-46  Bacteria  normal  0.223265  normal  0.0115884 
 
 
-
 
NC_008254  Meso_0599  methyl-accepting chemotaxis sensory transducer  42.47 
 
 
539 aa  182  1e-44  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3077  methyl-accepting chemotaxis sensory transducer  39.52 
 
 
560 aa  179  2e-43  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  hitchhiker  0.00601678 
 
 
-
 
NC_010725  Mpop_2956  methyl-accepting chemotaxis sensory transducer  40.88 
 
 
561 aa  175  1.9999999999999998e-42  Methylobacterium populi BJ001  Bacteria  normal  0.859245  normal 
 
 
-
 
NC_009675  Anae109_2399  methyl-accepting chemotaxis sensory transducer  38.85 
 
 
392 aa  175  2.9999999999999996e-42  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.17157  normal 
 
 
-
 
NC_010172  Mext_2838  chemotaxis sensory transducer  40.57 
 
 
582 aa  174  3.9999999999999995e-42  Methylobacterium extorquens PA1  Bacteria  normal  0.680816  normal 
 
 
-
 
NC_011757  Mchl_3064  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
582 aa  174  5e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.774088  normal  0.349443 
 
 
-
 
NC_010505  Mrad2831_2185  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
557 aa  172  2e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3016  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
539 aa  172  2e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.296337  normal  0.408298 
 
 
-
 
NC_010725  Mpop_1357  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
539 aa  165  2.0000000000000002e-39  Methylobacterium populi BJ001  Bacteria  normal  0.977036  normal  0.0183554 
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  32.06 
 
 
557 aa  156  1e-36  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1286  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
538 aa  154  4e-36  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2177  methyl-accepting chemotaxis sensory transducer  30.52 
 
 
628 aa  154  5e-36  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0358  methyl-accepting chemotaxis sensory transducer  32 
 
 
559 aa  153  1e-35  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0763  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
457 aa  152  2e-35  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0789  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
457 aa  152  2e-35  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3536  methyl-accepting chemotaxis sensory transducer  38.43 
 
 
414 aa  151  3e-35  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0382594 
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
533 aa  150  6e-35  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0637  methyl-accepting chemotaxis sensory transducer  31.66 
 
 
419 aa  149  1.0000000000000001e-34  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0646  methyl-accepting chemotaxis sensory transducer  31.66 
 
 
419 aa  149  1.0000000000000001e-34  Anaeromyxobacter sp. K  Bacteria  normal  0.737274  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  31.9 
 
 
549 aa  149  2.0000000000000003e-34  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0564  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.49 
 
 
660 aa  149  2.0000000000000003e-34  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.0020921  n/a   
 
 
-
 
NC_009486  Tpet_0550  methyl-accepting chemotaxis sensory transducer  30.49 
 
 
660 aa  149  2.0000000000000003e-34  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00000171017  n/a   
 
 
-
 
NC_007760  Adeh_0612  methyl-accepting chemotaxis sensory transducer  31.66 
 
 
419 aa  149  2.0000000000000003e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0476  methyl-accepting chemotaxis sensory transducer  31.13 
 
 
830 aa  149  2.0000000000000003e-34  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  26.07 
 
 
541 aa  148  4.0000000000000006e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  31.49 
 
 
533 aa  147  6e-34  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_009675  Anae109_0656  methyl-accepting chemotaxis sensory transducer  31.35 
 
 
422 aa  146  1e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.37161  normal 
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  32.74 
 
 
541 aa  146  1e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_013501  Rmar_1624  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
626 aa  146  1e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  0.835429  n/a   
 
 
-
 
NC_007947  Mfla_1245  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
543 aa  146  1e-33  Methylobacillus flagellatus KT  Bacteria  normal  0.403133  normal  0.310409 
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  25.74 
 
 
541 aa  146  1e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
544 aa  145  2e-33  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_007347  Reut_A2620  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
733 aa  145  2e-33  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0128  chemotaxis sensory transducer  30.37 
 
 
537 aa  145  2e-33  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1429  putative chemotaxis transducer  30.91 
 
 
542 aa  145  3e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  0.357089  n/a   
 
 
-
 
NC_011729  PCC7424_3002  methyl-accepting chemotaxis sensory transducer  28.5 
 
 
915 aa  145  3e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010681  Bphyt_3979  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
541 aa  144  5e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_16430  putative chemotaxis transducer  30.91 
 
 
542 aa  144  5e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.889289  normal 
 
 
-
 
NC_011729  PCC7424_2793  methyl-accepting chemotaxis sensory transducer  28.15 
 
 
778 aa  144  6e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013502  Rmar_2870  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
636 aa  144  7e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0501  methyl-accepting chemotaxis protein, putative  31.51 
 
 
558 aa  143  9e-33  Burkholderia thailandensis E264  Bacteria  normal  0.585218  n/a   
 
 
-
 
NC_008784  BMASAVP1_1398  putative methyl-accepting chemotaxis protein  31.51 
 
 
555 aa  143  9.999999999999999e-33  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2397  methyl-accepting chemotaxis sensory transducer  32.4 
 
 
686 aa  142  9.999999999999999e-33  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.688228 
 
 
-
 
NC_006349  BMAA0217  putative methyl-accepting chemotaxis protein  31.51 
 
 
558 aa  142  9.999999999999999e-33  Burkholderia mallei ATCC 23344  Bacteria  normal  0.482038  n/a   
 
 
-
 
NC_009075  BURPS668_A2687  methyl-accepting chemotaxis protein  31.51 
 
 
546 aa  143  9.999999999999999e-33  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1595  putative methyl-accepting chemotaxis protein  31.51 
 
 
555 aa  143  9.999999999999999e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  32.74 
 
 
541 aa  143  9.999999999999999e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_009078  BURPS1106A_A2542  methyl-accepting chemotaxis protein  31.51 
 
 
546 aa  143  9.999999999999999e-33  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0968  methyl-accepting chemotaxis transducer  31.51 
 
 
558 aa  142  9.999999999999999e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1197  methyl-accepting chemotaxis sensory transducer  26.12 
 
 
582 aa  142  9.999999999999999e-33  Desulfovibrio vulgaris DP4  Bacteria  normal  0.118848  hitchhiker  0.00410847 
 
 
-
 
NC_009616  Tmel_0322  methyl-accepting chemotaxis sensory transducer  30.56 
 
 
662 aa  142  9.999999999999999e-33  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0254  putative methyl-accepting chemotaxis protein  31.51 
 
 
546 aa  143  9.999999999999999e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1041  methyl-accepting chemotaxis protein  34.06 
 
 
541 aa  142  1.9999999999999998e-32  Geobacter sulfurreducens PCA  Bacteria  normal  0.893443  n/a   
 
 
-
 
NC_013161  Cyan8802_0788  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
484 aa  142  1.9999999999999998e-32  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  29.47 
 
 
542 aa  142  1.9999999999999998e-32  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3679  methyl-accepting chemotaxis sensory transducer  31.69 
 
 
558 aa  141  3e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0772371  normal 
 
 
-
 
NC_011726  PCC8801_0762  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
484 aa  141  3e-32  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_2901  putative methyl-accepting chemotaxis sensory transducer  30.42 
 
 
700 aa  141  3e-32  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.726182  n/a   
 
 
-
 
NC_008391  Bamb_5513  methyl-accepting chemotaxis sensory transducer  31.69 
 
 
558 aa  142  3e-32  Burkholderia ambifaria AMMD  Bacteria  normal  0.613268  normal 
 
 
-
 
NC_013161  Cyan8802_4347  methyl-accepting chemotaxis sensory transducer  28.74 
 
 
854 aa  141  3.9999999999999997e-32  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0506  chemotaxis sensory transducer  28.67 
 
 
982 aa  141  3.9999999999999997e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  0.202983  normal 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
646 aa  141  3.9999999999999997e-32  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_008609  Ppro_0724  methyl-accepting chemotaxis sensory transducer  30.98 
 
 
539 aa  141  3.9999999999999997e-32  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_4287  methyl-accepting chemotaxis sensory transducer  28.74 
 
 
854 aa  140  4.999999999999999e-32  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_0061  chemotaxis sensory transducer  28.78 
 
 
752 aa  140  4.999999999999999e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  0.691552  normal  0.30416 
 
 
-
 
NC_002939  GSU0756  methyl-accepting chemotaxis protein  35.05 
 
 
549 aa  140  6e-32  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0086  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.22 
 
 
599 aa  140  6e-32  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2112  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
571 aa  140  7.999999999999999e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3345  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
542 aa  140  8.999999999999999e-32  Geobacter sp. M21  Bacteria  n/a    normal  0.0226154 
 
 
-
 
NC_010682  Rpic_0615  methyl-accepting chemotaxis sensory transducer  32.74 
 
 
745 aa  139  1e-31  Ralstonia pickettii 12J  Bacteria  normal  0.685399  normal 
 
 
-
 
NC_002939  GSU2942  methyl-accepting chemotaxis protein  27.34 
 
 
544 aa  139  1e-31  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  31.69 
 
 
666 aa  139  1e-31  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_007604  Synpcc7942_1015  methyl-accepting chemotaxis sensory transducer  32.23 
 
 
839 aa  139  1e-31  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0741142  normal 
 
 
-
 
NC_011146  Gbem_3876  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
535 aa  139  1e-31  Geobacter bemidjiensis Bem  Bacteria  normal  0.74566  n/a   
 
 
-
 
NC_010322  PputGB1_1093  methyl-accepting chemotaxis sensory transducer  27.43 
 
 
540 aa  139  1e-31  Pseudomonas putida GB-1  Bacteria  normal  0.196472  normal 
 
 
-
 
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