| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1015 |
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| Symbol | |
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| ID | 3773943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1028418 |
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| End bp | 1030937 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637799435 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_400032 |
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| Protein GI | 81299824 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0741142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGA TGGCATCTGA AGACCGCAGC CTCTCCTACG AGCAAGTTGA ACAGGAGTAC
CTCAGTGGCC ACTACAGTGA AGCAGCTGAG CTAGCTGAGG CACTGGTTCA GACTGAGCCG
CAGAATCCTC GCCTGCGCTT GCTGCGCGGT CATATCTTCT ACAGCTTGGG GCGCAATGAC
CAAGCACGGG TCGAGTACGA GCTGATCCGG GGAATCACGC CCGATCCCGA CATTCTCGAG
CAGGCTCTGC TGGGAATGGA CCGTTGTGAT AGCCGCCCCC ACGAGGACGT TAGTTCGGAT
ATGGAAGGCA CGGTGATTGT GCCGATTGGG GCAGCTTTGC CGGTGATCGA ACAAGTGGAT
CCGTCGGCCC TAGCACTCGA TTTGCCCCCG CTGAGTGGTA CGGATACGAT CGCAGAGGAA
CCTAGCTCCG ATCGCGATGA TGGCGACAAT CCTTTTGCCA CCGATCCGGC TAGCCCTGCC
GCCTCTGAGA CCGAGGCTGA GGCACCAGCC TGGTTAGCGG ACATAGAAGA ATCAGCATTT
TCGTCCACGG ATGAATCGAG TCCCGAACCT TGGGCAGAGG CTGCGGAAGC TGAAGAGACA
GCGGTAGCGG AGCCAGCAGT AGAGGAAGCG ATCGCCCCAG CGGCAGAAAC GCTGATCGCC
AGTGAGCCTG AGGCGATTCC AGAGCCGCTG TCGCCAGAAG TCGATCTTGC TGAATCGCAG
CCGCCGATCA CAGCGGACGA GACTGTCGTA GAAGTTGATC TGGCCGCAGA GTTCGCCGCC
TTGGCTGAGC CAGAAGAGGT TGCCAGTGAG CCAGCCGCTT CTACTGCTGG GCTGGAGGAA
CCGGGGCCGG TCAGTTTTGA CGCGATCGCT GATGAAGTGG CCAAAGAGGT GCTCGGTGCA
GCAGAAACTG CCGTTGCGCC TCAGCCCGAG CTGAAAGCCA GTCCTGCCCC CGTTCTCGAG
AACCTACCCA CGCCGCCCAA CCTCGCTGAA GCTGCCGCGA TCGCTCGGCA ACCAGTGACG
TCCCCGCTGC GCCCCCAAGA GACCAAAGCC AATCGGGCAG CTGTTGCGGC CACTCCTGCC
AGCAATGCAC CCAAAGCCTT ACCAACCCCG CCCAAGCAAA CAGCAGAAAC CCGTGTTGGC
TTAATCGCCC TGGTCTCAGC CCTAGCTGCT GCTGCCGTAG GGGTGGTTGG CTGGCAAGCT
TCAACACCCG AAGCCCGCAA CCGCGTTGTG CTCGCCAGCA TGGCCAGCAT GGCTGTGGCT
GGGGCTGCCT CTGCTGGTAT TGCTCTGCAG CTGCAGAACC GGACGGGCAA GCGCTACCGC
GATCTGCTGG AGCGACTTAA TGAACAGTGC CAGCAGATGA GTAATGGCGA CTTTGAAACG
CCTCTCCAAG TCGGTGGCAA CGATGATGTC GGGATGTTGG CCCTGCGCTT CGATCGTATG
CGCAGTGTCT TGGGCGATCG CATCAACCGC CAAGAGAAGC GCCTGACCAC CCTAGAGCAG
CAACGGGAAG GCCTCCAAAA CCAGGTGATT CGTCTGCTGG ACGACGTAGA GGGGGTAGCC
CACGGTGACT TGACCGTTCA GGCTGAGGTG ACGGCCGACG TTCTCGGGGC CGTGGCGGAC
TCGTTCAACC TGACGATTCA GAACCTACGC GAGATCGTGG CCCAGGTGCG CGATGCAGCA
CTGCAGGTCA ACGCAGCCGC AACCGACAAC GAACAGTCCG CGAAAAACCT GTCAGCGGAA
GCGCTCCACC AAGCCGAGGA ACTCGCCGCT GCCCTCAACT CAGTCCAGGT GATGACGGAG
TCGATTCAAC GGGTTGCCAT CAGTGCCAGC GAAGCGGAGT CGGTCGCCCG CGCTGCTTCG
CAAACAGCTC TCAAGGGCGG TGAGGCGGTT GACAAGACCC TCTCAGGGAT TTTGCGGATT
CGCGAAACGG TGGCCGAAAC AACCCGCAAG GTGAAGAAGC TGGCCGAGTC TTCCCAAGAA
ATTTCCAAGA TCGTGGCGCT GATCTCGCAG GTCGCTTCAC GAACCAACCT GTTGGCACTC
AACGCCAGCA TTGAGGCAGC TCGGGCCGGT CAAGCCGGAC GAGGGTTTGC GATCGTTGCG
GATGAGGTTC GCCAGCTGGC CGATCGCGCC GCGAAGTCCT CGAAGGAGAT TGAGCAGATC
GTGCTCAAGA TTCAGAGTGA GACAGGTTTG GTAATGACTG CCATGGAGGA GGGTACCCAG
CAGGTGATTC AAGGGACGCG ACTGGCAGAA CAGGCCCGTG GTGCTCTTGA TGAAATCATT
CAGGTTTCGA CCAAAATTGA CGACCTTGTC CAATCGATTA CGGCCGACAC TGTGCAACAG
ACCGCCATGT CTCGCAGCAT GGCCGAGGTG ATGCAGTCGG TGGAGACCAC CGCTCAAAAC
ACCTCTCAAG AGGCGCAGCA AGTGGCTGCT TCCCTGCAGG GCTTGGTAAA TATTGCAGGG
ACGTTGCGAG AGTCTGTGGA CCGCTTCCGC CTACAAGCAT CGGCTGCTAA GGAGAACTGA
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| Protein sequence | MTSMASEDRS LSYEQVEQEY LSGHYSEAAE LAEALVQTEP QNPRLRLLRG HIFYSLGRND
QARVEYELIR GITPDPDILE QALLGMDRCD SRPHEDVSSD MEGTVIVPIG AALPVIEQVD
PSALALDLPP LSGTDTIAEE PSSDRDDGDN PFATDPASPA ASETEAEAPA WLADIEESAF
SSTDESSPEP WAEAAEAEET AVAEPAVEEA IAPAAETLIA SEPEAIPEPL SPEVDLAESQ
PPITADETVV EVDLAAEFAA LAEPEEVASE PAASTAGLEE PGPVSFDAIA DEVAKEVLGA
AETAVAPQPE LKASPAPVLE NLPTPPNLAE AAAIARQPVT SPLRPQETKA NRAAVAATPA
SNAPKALPTP PKQTAETRVG LIALVSALAA AAVGVVGWQA STPEARNRVV LASMASMAVA
GAASAGIALQ LQNRTGKRYR DLLERLNEQC QQMSNGDFET PLQVGGNDDV GMLALRFDRM
RSVLGDRINR QEKRLTTLEQ QREGLQNQVI RLLDDVEGVA HGDLTVQAEV TADVLGAVAD
SFNLTIQNLR EIVAQVRDAA LQVNAAATDN EQSAKNLSAE ALHQAEELAA ALNSVQVMTE
SIQRVAISAS EAESVARAAS QTALKGGEAV DKTLSGILRI RETVAETTRK VKKLAESSQE
ISKIVALISQ VASRTNLLAL NASIEAARAG QAGRGFAIVA DEVRQLADRA AKSSKEIEQI
VLKIQSETGL VMTAMEEGTQ QVIQGTRLAE QARGALDEII QVSTKIDDLV QSITADTVQQ
TAMSRSMAEV MQSVETTAQN TSQEAQQVAA SLQGLVNIAG TLRESVDRFR LQASAAKEN
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