Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1015 |
Symbol | |
ID | 3773943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1028418 |
End bp | 1030937 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637799435 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_400032 |
Protein GI | 81299824 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0741142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCGA TGGCATCTGA AGACCGCAGC CTCTCCTACG AGCAAGTTGA ACAGGAGTAC CTCAGTGGCC ACTACAGTGA AGCAGCTGAG CTAGCTGAGG CACTGGTTCA GACTGAGCCG CAGAATCCTC GCCTGCGCTT GCTGCGCGGT CATATCTTCT ACAGCTTGGG GCGCAATGAC CAAGCACGGG TCGAGTACGA GCTGATCCGG GGAATCACGC CCGATCCCGA CATTCTCGAG CAGGCTCTGC TGGGAATGGA CCGTTGTGAT AGCCGCCCCC ACGAGGACGT TAGTTCGGAT ATGGAAGGCA CGGTGATTGT GCCGATTGGG GCAGCTTTGC CGGTGATCGA ACAAGTGGAT CCGTCGGCCC TAGCACTCGA TTTGCCCCCG CTGAGTGGTA CGGATACGAT CGCAGAGGAA CCTAGCTCCG ATCGCGATGA TGGCGACAAT CCTTTTGCCA CCGATCCGGC TAGCCCTGCC GCCTCTGAGA CCGAGGCTGA GGCACCAGCC TGGTTAGCGG ACATAGAAGA ATCAGCATTT TCGTCCACGG ATGAATCGAG TCCCGAACCT TGGGCAGAGG CTGCGGAAGC TGAAGAGACA GCGGTAGCGG AGCCAGCAGT AGAGGAAGCG ATCGCCCCAG CGGCAGAAAC GCTGATCGCC AGTGAGCCTG AGGCGATTCC AGAGCCGCTG TCGCCAGAAG TCGATCTTGC TGAATCGCAG CCGCCGATCA CAGCGGACGA GACTGTCGTA GAAGTTGATC TGGCCGCAGA GTTCGCCGCC TTGGCTGAGC CAGAAGAGGT TGCCAGTGAG CCAGCCGCTT CTACTGCTGG GCTGGAGGAA CCGGGGCCGG TCAGTTTTGA CGCGATCGCT GATGAAGTGG CCAAAGAGGT GCTCGGTGCA GCAGAAACTG CCGTTGCGCC TCAGCCCGAG CTGAAAGCCA GTCCTGCCCC CGTTCTCGAG AACCTACCCA CGCCGCCCAA CCTCGCTGAA GCTGCCGCGA TCGCTCGGCA ACCAGTGACG TCCCCGCTGC GCCCCCAAGA GACCAAAGCC AATCGGGCAG CTGTTGCGGC CACTCCTGCC AGCAATGCAC CCAAAGCCTT ACCAACCCCG CCCAAGCAAA CAGCAGAAAC CCGTGTTGGC TTAATCGCCC TGGTCTCAGC CCTAGCTGCT GCTGCCGTAG GGGTGGTTGG CTGGCAAGCT TCAACACCCG AAGCCCGCAA CCGCGTTGTG CTCGCCAGCA TGGCCAGCAT GGCTGTGGCT GGGGCTGCCT CTGCTGGTAT TGCTCTGCAG CTGCAGAACC GGACGGGCAA GCGCTACCGC GATCTGCTGG AGCGACTTAA TGAACAGTGC CAGCAGATGA GTAATGGCGA CTTTGAAACG CCTCTCCAAG TCGGTGGCAA CGATGATGTC GGGATGTTGG CCCTGCGCTT CGATCGTATG CGCAGTGTCT TGGGCGATCG CATCAACCGC CAAGAGAAGC GCCTGACCAC CCTAGAGCAG CAACGGGAAG GCCTCCAAAA CCAGGTGATT CGTCTGCTGG ACGACGTAGA GGGGGTAGCC CACGGTGACT TGACCGTTCA GGCTGAGGTG ACGGCCGACG TTCTCGGGGC CGTGGCGGAC TCGTTCAACC TGACGATTCA GAACCTACGC GAGATCGTGG CCCAGGTGCG CGATGCAGCA CTGCAGGTCA ACGCAGCCGC AACCGACAAC GAACAGTCCG CGAAAAACCT GTCAGCGGAA GCGCTCCACC AAGCCGAGGA ACTCGCCGCT GCCCTCAACT CAGTCCAGGT GATGACGGAG TCGATTCAAC GGGTTGCCAT CAGTGCCAGC GAAGCGGAGT CGGTCGCCCG CGCTGCTTCG CAAACAGCTC TCAAGGGCGG TGAGGCGGTT GACAAGACCC TCTCAGGGAT TTTGCGGATT CGCGAAACGG TGGCCGAAAC AACCCGCAAG GTGAAGAAGC TGGCCGAGTC TTCCCAAGAA ATTTCCAAGA TCGTGGCGCT GATCTCGCAG GTCGCTTCAC GAACCAACCT GTTGGCACTC AACGCCAGCA TTGAGGCAGC TCGGGCCGGT CAAGCCGGAC GAGGGTTTGC GATCGTTGCG GATGAGGTTC GCCAGCTGGC CGATCGCGCC GCGAAGTCCT CGAAGGAGAT TGAGCAGATC GTGCTCAAGA TTCAGAGTGA GACAGGTTTG GTAATGACTG CCATGGAGGA GGGTACCCAG CAGGTGATTC AAGGGACGCG ACTGGCAGAA CAGGCCCGTG GTGCTCTTGA TGAAATCATT CAGGTTTCGA CCAAAATTGA CGACCTTGTC CAATCGATTA CGGCCGACAC TGTGCAACAG ACCGCCATGT CTCGCAGCAT GGCCGAGGTG ATGCAGTCGG TGGAGACCAC CGCTCAAAAC ACCTCTCAAG AGGCGCAGCA AGTGGCTGCT TCCCTGCAGG GCTTGGTAAA TATTGCAGGG ACGTTGCGAG AGTCTGTGGA CCGCTTCCGC CTACAAGCAT CGGCTGCTAA GGAGAACTGA
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Protein sequence | MTSMASEDRS LSYEQVEQEY LSGHYSEAAE LAEALVQTEP QNPRLRLLRG HIFYSLGRND QARVEYELIR GITPDPDILE QALLGMDRCD SRPHEDVSSD MEGTVIVPIG AALPVIEQVD PSALALDLPP LSGTDTIAEE PSSDRDDGDN PFATDPASPA ASETEAEAPA WLADIEESAF SSTDESSPEP WAEAAEAEET AVAEPAVEEA IAPAAETLIA SEPEAIPEPL SPEVDLAESQ PPITADETVV EVDLAAEFAA LAEPEEVASE PAASTAGLEE PGPVSFDAIA DEVAKEVLGA AETAVAPQPE LKASPAPVLE NLPTPPNLAE AAAIARQPVT SPLRPQETKA NRAAVAATPA SNAPKALPTP PKQTAETRVG LIALVSALAA AAVGVVGWQA STPEARNRVV LASMASMAVA GAASAGIALQ LQNRTGKRYR DLLERLNEQC QQMSNGDFET PLQVGGNDDV GMLALRFDRM RSVLGDRINR QEKRLTTLEQ QREGLQNQVI RLLDDVEGVA HGDLTVQAEV TADVLGAVAD SFNLTIQNLR EIVAQVRDAA LQVNAAATDN EQSAKNLSAE ALHQAEELAA ALNSVQVMTE SIQRVAISAS EAESVARAAS QTALKGGEAV DKTLSGILRI RETVAETTRK VKKLAESSQE ISKIVALISQ VASRTNLLAL NASIEAARAG QAGRGFAIVA DEVRQLADRA AKSSKEIEQI VLKIQSETGL VMTAMEEGTQ QVIQGTRLAE QARGALDEII QVSTKIDDLV QSITADTVQQ TAMSRSMAEV MQSVETTAQN TSQEAQQVAA SLQGLVNIAG TLRESVDRFR LQASAAKEN
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