Gene Mpop_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2956 
Symbol 
ID6310674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3184674 
End bp3186359 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content70% 
IMG OID642651682 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001925646 
Protein GI188582201 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.859245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCTCT CGATCGGAAA ACGCATCCTC CTCGGCTTCG TCGCGGCCAG CCTGATCGTC 
GCGGCTCTGG GCGCGTACGC CCTGCGCCAG ATCGGCAGCG TGCGCGACAT GACCGACCTG
ATCGTGACCC GCGACGTCGG CGTGCTGCGC CAGCTCGACG ACCTCGGCAA CGTCGCCCGC
AATATGGGCC TCGTACGGCG CAACGCGGTG ATCGCCGTCC TGACGCAGGG ACAGGGCAAC
AGCGCTTCCC CGTCGACCCG GCAGGACGAC TTCCTGGGGA GCTGGCGCCA GAACGTGGCG
GAGCTGGAGC GGCTGCTCAA CACCATCGCC GGCGAGGTGA AGGAGTATCA ATCCACCGCC
CTCTCCGCCG AGCGCGTGGC CGCCTGGAAC CGCCTCGGCA GCGTCTTCAC CGAGACCGGC
GAGGCGTTCC GTCTGGTCCG CAGCGCCAGC GAACAGCAGC TGCGCGCCGT GGATGCCCGG
GACATCGCCA CGGTCGAGAC GCGGAACGAC GAGGTCAACC GGCTTCACGA CGGCCTGCTG
CGCAGCATTG CCAACGCCCG CACGGCGCTG GACGGCGTCA TCGCCGCGGG CCAGCACAGC
GTGAGCGAGA TCTACCGCAA CAGTCTCCTC TCCGTGGCGA TCACGGTCGC CGCTTCGATC
CTGCTGTCGA TCCTCGTCAC GGCGCTGATC AGCCGCGCGG TGGTCCGCCC GCTGGAGGAC
GTGATGCGCT TCGTCGCGCA GATCGGCGCG GGCGACCTGA CGGGGCGCCT GAACCGGACC
GGCAACGACG AGATCGGACG GCTCGGCGAC ACACTGAACG GGATGGTGGC CGGCCTGTCC
GACCTCGCCC GAACCAACCG CGCCGCCACC GCCGACTTGA ACGCCGCGGC GGCGGAGATC
CGCGCCTCGG CCCAGGAGCA GGCGGCGAGC GTCGAGGAGC AGTTCGCCGC GGTGCAGGAG
ACGGCGGCGA CGGTCGACGA GATCACCCAT TCCGGCGCCC AGATCTCGAA GCGCGCCACC
GAGGTGATCG CCACGGCGCA AGCTGCGGCG CAGACCGCCC GCTCGGGCCT GCGCGCCGCC
ACCGACACCG CCAAGGCGAT GGAATCGATC CGCGAGCAGG GCGAGGCGGT CGCCGGCAAC
ATCGTGGCGC TCTCCGAGAA GACGCAGGCG ATCGGCGAGA TCATCGTCAC CGTCAACGAC
ATCTCCGAGC GCACCCACCT GCTCGCCCTC AACGCCGCCA TCGAGGCGGC GGCGGCGGGC
GAGAGCGGTC GCAGCTTCGC CGTCGTCGCC TCGGAGATGA AGCTGCTCGC CGATCAGGCG
AAGGGCGCCA CAGCCCAGGT GCGCGGCATC CTCGGGGAGA TTCAGCGCGG CATCAACGCC
TCGGTGATGC TCACCGAGGA GGCGGTCAAG CGCGCCGCTG CCGGCAAGAA CCGCACCGAT
TCGACCGTGC GCACGATCGA GGAGATGGCC GCTCGGGTGG AGGAGGGCGT GCAGACCTTC
CAGCAGATCG TGGCCTCGAC CAACCAGCAG CAGCTCGGCA TCGAGCAGGT GATGGGGGCG
CTCCAGAACA TCCGGCAGGC GAGCCAGCAG ACGGCCGCGG GCACCCGGGA GGTCGAGACC
GCCTCGGCGA ACCTGACCGA GCTGGCGCAG GGACTGATGG CGCTGGCCGA GCGCTACCGG
CTCTAG
 
Protein sequence
MSLSIGKRIL LGFVAASLIV AALGAYALRQ IGSVRDMTDL IVTRDVGVLR QLDDLGNVAR 
NMGLVRRNAV IAVLTQGQGN SASPSTRQDD FLGSWRQNVA ELERLLNTIA GEVKEYQSTA
LSAERVAAWN RLGSVFTETG EAFRLVRSAS EQQLRAVDAR DIATVETRND EVNRLHDGLL
RSIANARTAL DGVIAAGQHS VSEIYRNSLL SVAITVAASI LLSILVTALI SRAVVRPLED
VMRFVAQIGA GDLTGRLNRT GNDEIGRLGD TLNGMVAGLS DLARTNRAAT ADLNAAAAEI
RASAQEQAAS VEEQFAAVQE TAATVDEITH SGAQISKRAT EVIATAQAAA QTARSGLRAA
TDTAKAMESI REQGEAVAGN IVALSEKTQA IGEIIVTVND ISERTHLLAL NAAIEAAAAG
ESGRSFAVVA SEMKLLADQA KGATAQVRGI LGEIQRGINA SVMLTEEAVK RAAAGKNRTD
STVRTIEEMA ARVEEGVQTF QQIVASTNQQ QLGIEQVMGA LQNIRQASQQ TAAGTREVET
ASANLTELAQ GLMALAERYR L