Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3254 |
Symbol | |
ID | 8545642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4486844 |
End bp | 4488682 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646387921 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_003267649 |
Protein GI | 262196440 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0159313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0166963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATGGA CCGTTGCCGG CAAGATCGCG GCAGGATTCG GTGTTCTGGT CGCCTTCATC CTCGGCCTCG CCACCGTGCA GTGGTACGAG AGCTCCGAGG TCAACGAGCA GATCGAGCGC ATGTACCAGA GCGGCGTCGA GGGCACGCGC GAGCTCGGTG AGGCCTACGG GATGCTGCAG CGCATCCGCG GGCGGGTCTT CTATCACGTG GCCGTGGACG AGGCCGCCGC CAAGCAGGAG GTGGAGTCGC AGATCGGCAG CAACAAACGC GAGTTCGAGG AGCGGCTCGA GGCGGCCGAA GACCTGGCCA AGCGCTACAT CACTGACGGC GACACCAGGG CCAAGTACCT GCGGCACACC GCCGAGATCC GCGACCGCTT CGAGACCTAC ATGCGCATGC TCACCGACGG CGTGATGCGC GAGAGCCGCA TCGGCGACTC GGTGGGCGCG CTGTCCGAAA TCCGCGAAAC CAAGACCGTG GTCGAGGAGC TGATCGCCGA GTTCGAGGTG CTGATGCAGC TCCACGTGGC CAGCAATCAG TCGATCAACC GCGACGTCGA CGACACCCTC AAGATCGCCC AGGCGGTCTC GCTGGTCGGC AGCCTGGCCG CGCTGCTGGC CGCCATGCTG GTGGGCTGGC TCATGGCCCG CAGCATCTCG TCGCGGCTGC GCAGCGTGGC CACCGTGGCC GGCCGGGTGA GCCAGGGACA GCTCGACGAG CGCGCCCACG TCACCGGCCA CGATGAGATC ACCCAGGTCG CCACCGCCCT CAACGAGATG GCGGCCGCCC TGGCCGAGCA GATCGCCGAG GCCAACGCCA ACGCCGCGGC CGACGCCGCC AAGCGCCAGA GCCTGGCCGA CAGCGTCGCC CGCTACGGCG AGTTCGTCGA GCGCGTGGCC CGCGGCGAGC TCACGGCCAT GCTCGAGGTC GGCAACGGCG ACAGCCTGGG CGCGCTGGGC AACAACCTCA GCGCCATGGT CAAAGCGCTG CGCACCATGA CCCTGCGCAC GCACGAAGCC GTGGGCGCGC TGTCCACGGC CTCGGCCGAG ATCCTGGCGA CCATCCAGGA GCACGGCGCC AGCGCCAACG AGTCGGCCAG CGCCGTGGCC GAGACCGCGG CCACGGTCGA CGAGGTCCAC CAGTCGTCGC AGCGCGTGGC CGAGCAGGCC CAGCACGTGG CCGAGGCCTC GCAGCAGAGC GTCGAGGTGT CGACCGCCGG ACGCCGCGCC GTGGACCACA CGGTGAGCAC CATGCGCGAC GTGCGCTCGC AGGTCGACAC CATCGCCGAG CGCATCCTCA TGCTGTCCGA GCAGGCGCAG GCGGTCAGCC AGATCATCAC CACGGTCAAC GAGCTCGCCG AGCAGTCCAA CCTGCTGGCG CTCAACGCCT CGATCGAGGC CGCGCGCGCC GGCGAGGAAG GCCGCGGCTT CGCCGTGGTC GCCAAGGAGA TCCGGGTGCT CGCCGATCAG TCGCGCGAGG CCACGGCCCA GGTGCGCAGC ATCCTGGGCG AGATCCAGAA ATCCACCACC CAGGCGGTGC TCGAGACCGA GCGCGGCAGC AACGCCGCGG CTCAGGCCGA GGACGCCGTG CGCGCGGCCG GCGCGCATAT CGACCAGTTG GCCGAAACCA TCGACGAGTC GTCGCAGGCC GCGCAGCACA TCCTGGCCGC CTCCAAGCAG CAGGTCGCCG GCGTGAGCCA GATCTCCCAG GCCATGCACT CGATCACCGA GGCCTCGCGG CAGACGGTGG AAGGCACGCG CAACGTCGAG AGCGCGGTGC GCGACCTCAA CCAGCTCAGC GGAAATCTGC GCGACGCCGT GGCCCAGTAC CGGATCTGA
|
Protein sequence | MRWTVAGKIA AGFGVLVAFI LGLATVQWYE SSEVNEQIER MYQSGVEGTR ELGEAYGMLQ RIRGRVFYHV AVDEAAAKQE VESQIGSNKR EFEERLEAAE DLAKRYITDG DTRAKYLRHT AEIRDRFETY MRMLTDGVMR ESRIGDSVGA LSEIRETKTV VEELIAEFEV LMQLHVASNQ SINRDVDDTL KIAQAVSLVG SLAALLAAML VGWLMARSIS SRLRSVATVA GRVSQGQLDE RAHVTGHDEI TQVATALNEM AAALAEQIAE ANANAAADAA KRQSLADSVA RYGEFVERVA RGELTAMLEV GNGDSLGALG NNLSAMVKAL RTMTLRTHEA VGALSTASAE ILATIQEHGA SANESASAVA ETAATVDEVH QSSQRVAEQA QHVAEASQQS VEVSTAGRRA VDHTVSTMRD VRSQVDTIAE RILMLSEQAQ AVSQIITTVN ELAEQSNLLA LNASIEAARA GEEGRGFAVV AKEIRVLADQ SREATAQVRS ILGEIQKSTT QAVLETERGS NAAAQAEDAV RAAGAHIDQL AETIDESSQA AQHILAASKQ QVAGVSQISQ AMHSITEASR QTVEGTRNVE SAVRDLNQLS GNLRDAVAQY RI
|
| |