More than 300 homologs were found in PanDaTox collection
for query gene Gbem_2028 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_2028  methyl-accepting chemotaxis sensory transducer  100 
 
 
626 aa  1249    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2191  methyl-accepting chemotaxis sensory transducer  95.63 
 
 
618 aa  1177    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2709  methyl-accepting chemotaxis sensory transducer  57.86 
 
 
537 aa  338  1.9999999999999998e-91  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2464  methyl-accepting chemotaxis sensory transducer  38.88 
 
 
576 aa  335  1e-90  Polaromonas sp. JS666  Bacteria  normal  0.681434  normal  0.078155 
 
 
-
 
NC_007948  Bpro_2463  methyl-accepting chemotaxis sensory transducer  51.98 
 
 
512 aa  295  2e-78  Polaromonas sp. JS666  Bacteria  normal  0.735637  normal  0.0793518 
 
 
-
 
NC_011832  Mpal_1328  methyl-accepting chemotaxis sensory transducer  48.79 
 
 
543 aa  285  2.0000000000000002e-75  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_0990  methyl-accepting chemotaxis sensory transducer  40.05 
 
 
824 aa  281  3e-74  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.256608 
 
 
-
 
NC_007614  Nmul_A0332  methyl-accepting chemotaxis sensory transducer  56.94 
 
 
497 aa  279  9e-74  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2465  methyl-accepting chemotaxis sensory transducer  48.28 
 
 
555 aa  275  2.0000000000000002e-72  Polaromonas sp. JS666  Bacteria  normal  0.834372  normal  0.0349736 
 
 
-
 
NC_013440  Hoch_3254  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
612 aa  254  3e-66  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0159313  normal  0.0166963 
 
 
-
 
NC_007796  Mhun_0495  methyl-accepting chemotaxis sensory transducer  43.29 
 
 
795 aa  248  3e-64  Methanospirillum hungatei JF-1  Archaea  normal  0.132321  normal 
 
 
-
 
NC_009051  Memar_0239  methyl-accepting chemotaxis sensory transducer  35.57 
 
 
793 aa  233  6e-60  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009767  Rcas_3201  methyl-accepting chemotaxis sensory transducer  31.32 
 
 
608 aa  227  6e-58  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.608915 
 
 
-
 
NC_009523  RoseRS_0999  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
625 aa  213  1e-53  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3434  methyl-accepting chemotaxis sensory transducer  34.26 
 
 
750 aa  212  2e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.364699  normal  0.15182 
 
 
-
 
NC_009675  Anae109_2399  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
392 aa  208  2e-52  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.17157  normal 
 
 
-
 
NC_008576  Mmc1_1833  methyl-accepting chemotaxis sensory transducer  39.87 
 
 
515 aa  202  1.9999999999999998e-50  Magnetococcus sp. MC-1  Bacteria  normal  0.239593  normal 
 
 
-
 
NC_009621  Smed_5117  methyl-accepting chemotaxis sensory transducer  38.91 
 
 
545 aa  197  3e-49  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0275586 
 
 
-
 
NC_008576  Mmc1_0739  methyl-accepting chemotaxis sensory transducer  28.91 
 
 
665 aa  194  6e-48  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.839278 
 
 
-
 
NC_009523  RoseRS_1510  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
751 aa  193  1e-47  Roseiflexus sp. RS-1  Bacteria  normal  0.795012  normal  0.0658131 
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  29.17 
 
 
640 aa  186  9e-46  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1872  methyl-accepting chemotaxis sensory transducer  34.42 
 
 
555 aa  186  1.0000000000000001e-45  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2296  methyl-accepting chemotaxis sensory transducer  36.25 
 
 
544 aa  183  8.000000000000001e-45  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.786349  normal 
 
 
-
 
NC_008254  Meso_0599  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
539 aa  179  1e-43  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  27.36 
 
 
542 aa  179  1e-43  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1194  methyl-accepting chemotaxis sensory transducer  37.83 
 
 
547 aa  177  5e-43  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.705182  n/a   
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  28.11 
 
 
640 aa  176  9.999999999999999e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_011891  A2cp1_2772  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
547 aa  176  9.999999999999999e-43  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0543063  n/a   
 
 
-
 
NC_011145  AnaeK_2677  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
547 aa  174  3.9999999999999995e-42  Anaeromyxobacter sp. K  Bacteria  normal  0.0498227  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  23.89 
 
 
686 aa  172  1e-41  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  27.01 
 
 
637 aa  170  9e-41  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  30.91 
 
 
640 aa  170  9e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  26.68 
 
 
557 aa  167  5.9999999999999996e-40  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3077  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
560 aa  167  8e-40  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  hitchhiker  0.00601678 
 
 
-
 
NC_010511  M446_0243  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
561 aa  165  2.0000000000000002e-39  Methylobacterium sp. 4-46  Bacteria  normal  0.223265  normal  0.0115884 
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  25.25 
 
 
602 aa  166  2.0000000000000002e-39  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3406  methyl-accepting chemotaxis sensory transducer  26.28 
 
 
712 aa  165  2.0000000000000002e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.0894354  normal 
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  27.81 
 
 
650 aa  164  6e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_011894  Mnod_5452  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
558 aa  164  6e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.397203  n/a   
 
 
-
 
NC_013522  Taci_0358  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
559 aa  163  1e-38  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2692  methyl-accepting chemotaxis sensory transducer  27.98 
 
 
768 aa  162  2e-38  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0996  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.85 
 
 
823 aa  162  2e-38  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3016  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
539 aa  160  5e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.296337  normal  0.408298 
 
 
-
 
NC_008009  Acid345_1774  methyl-accepting chemotaxis sensory transducer  29.95 
 
 
671 aa  160  9e-38  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4223  methyl-accepting chemotaxis sensory transducer  25.78 
 
 
689 aa  159  1e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.946735  normal  0.191331 
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  32.33 
 
 
544 aa  158  3e-37  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_010505  Mrad2831_2185  methyl-accepting chemotaxis sensory transducer  39.02 
 
 
557 aa  157  7e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0039  methyl-accepting chemotaxis sensory transducer  24.41 
 
 
623 aa  156  8e-37  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  28.67 
 
 
727 aa  155  2e-36  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_009675  Anae109_3536  methyl-accepting chemotaxis sensory transducer  32.9 
 
 
414 aa  154  4e-36  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0382594 
 
 
-
 
NC_013501  Rmar_1624  methyl-accepting chemotaxis sensory transducer  30.86 
 
 
626 aa  154  5e-36  Rhodothermus marinus DSM 4252  Bacteria  normal  0.835429  n/a   
 
 
-
 
NC_010725  Mpop_1357  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
539 aa  153  1e-35  Methylobacterium populi BJ001  Bacteria  normal  0.977036  normal  0.0183554 
 
 
-
 
NC_013501  Rmar_2177  methyl-accepting chemotaxis sensory transducer  28.38 
 
 
628 aa  152  1e-35  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  33.63 
 
 
540 aa  152  2e-35  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  25.99 
 
 
544 aa  152  2e-35  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  33.73 
 
 
549 aa  151  3e-35  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1041  methyl-accepting chemotaxis protein  31.71 
 
 
541 aa  151  3e-35  Geobacter sulfurreducens PCA  Bacteria  normal  0.893443  n/a   
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  27.79 
 
 
642 aa  151  3e-35  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  38.25 
 
 
541 aa  151  3e-35  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2956  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
561 aa  151  4e-35  Methylobacterium populi BJ001  Bacteria  normal  0.859245  normal 
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  28.3 
 
 
541 aa  150  5e-35  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
543 aa  150  7e-35  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013502  Rmar_2870  methyl-accepting chemotaxis sensory transducer  30.86 
 
 
636 aa  150  7e-35  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2838  chemotaxis sensory transducer  39.49 
 
 
582 aa  150  9e-35  Methylobacterium extorquens PA1  Bacteria  normal  0.680816  normal 
 
 
-
 
NC_007519  Dde_1627  methyl-accepting chemotaxis sensory transducer  31.06 
 
 
733 aa  149  1.0000000000000001e-34  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.426202  n/a   
 
 
-
 
NC_007973  Rmet_0672  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
733 aa  150  1.0000000000000001e-34  Cupriavidus metallidurans CH34  Bacteria  normal  0.371682  normal  0.522662 
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  31.35 
 
 
601 aa  149  1.0000000000000001e-34  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_011757  Mchl_3064  methyl-accepting chemotaxis sensory transducer  40 
 
 
582 aa  149  1.0000000000000001e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.774088  normal  0.349443 
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  34.02 
 
 
661 aa  149  2.0000000000000003e-34  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2620  methyl-accepting chemotaxis sensory transducer  35.02 
 
 
733 aa  149  2.0000000000000003e-34  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
540 aa  147  4.0000000000000006e-34  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  25.32 
 
 
541 aa  147  4.0000000000000006e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_012793  GWCH70_1221  methyl-accepting chemotaxis sensory transducer  32.36 
 
 
564 aa  147  5e-34  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000139892  n/a   
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  34.06 
 
 
541 aa  147  5e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_007005  Psyr_2682  histidine kinase, HAMP region: chemotaxis sensory transducer  31.17 
 
 
723 aa  147  6e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.121525  normal 
 
 
-
 
NC_002939  GSU2579  methyl-accepting chemotaxis protein  32.47 
 
 
543 aa  147  8.000000000000001e-34  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  32.46 
 
 
533 aa  146  9e-34  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_007492  Pfl01_5305  chemotaxis sensory transducer  32.63 
 
 
686 aa  146  1e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.115158  normal  0.281343 
 
 
-
 
NC_008340  Mlg_0358  methyl-accepting chemotaxis sensory transducer  32.99 
 
 
560 aa  146  1e-33  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0237962  normal  0.734928 
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
544 aa  146  1e-33  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  33.33 
 
 
549 aa  145  2e-33  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  30.52 
 
 
674 aa  145  2e-33  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_007517  Gmet_0529  methyl-accepting chemotaxis sensory transducer  31.69 
 
 
544 aa  145  2e-33  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_00480  methyl-accepting chemotaxis sensory transducer  33.54 
 
 
676 aa  144  4e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5092  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
626 aa  144  5e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.359668  normal  0.0114189 
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  33.04 
 
 
540 aa  144  5e-33  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  32.59 
 
 
565 aa  144  5e-33  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  33.92 
 
 
547 aa  144  6e-33  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_008751  Dvul_2315  methyl-accepting chemotaxis sensory transducer  28.27 
 
 
679 aa  144  6e-33  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.0977353 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  25.48 
 
 
587 aa  143  7e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  30.7 
 
 
543 aa  143  8e-33  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2942  methyl-accepting chemotaxis protein  33.05 
 
 
544 aa  143  9e-33  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0128  chemotaxis sensory transducer  33.13 
 
 
537 aa  143  9e-33  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  32.69 
 
 
570 aa  142  9.999999999999999e-33  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
550 aa  143  9.999999999999999e-33  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_011830  Dhaf_0079  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.37 
 
 
588 aa  143  9.999999999999999e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.031352  n/a   
 
 
-
 
NC_009767  Rcas_4205  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
513 aa  142  9.999999999999999e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0616634  normal  0.221453 
 
 
-
 
NC_009783  VIBHAR_02691  hypothetical protein  31.71 
 
 
535 aa  142  1.9999999999999998e-32  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012848  Rleg_4670  methyl-accepting chemotaxis sensory transducer  28.38 
 
 
625 aa  142  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.817515 
 
 
-
 
NC_008609  Ppro_3465  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
423 aa  142  1.9999999999999998e-32  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
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