More than 300 homologs were found in PanDaTox collection
for query gene Smed_0232 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009636  Smed_0232  methyl-accepting chemotaxis sensory transducer  100 
 
 
532 aa  1047    Sinorhizobium medicae WSM419  Bacteria  normal  0.812987  normal  0.159034 
 
 
-
 
NC_012850  Rleg_0327  methyl-accepting chemotaxis sensory transducer  53.98 
 
 
544 aa  489  1e-137  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.141004  normal 
 
 
-
 
NC_011369  Rleg2_0295  methyl-accepting chemotaxis sensory transducer  53.39 
 
 
542 aa  474  1e-132  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.579755 
 
 
-
 
NC_011989  Avi_4081  methyl-accepting chemotaxis protein  53.35 
 
 
556 aa  461  9.999999999999999e-129  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0173  methyl-accepting chemotaxis sensory transducer  32.95 
 
 
545 aa  259  7e-68  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.074609 
 
 
-
 
NC_010338  Caul_2435  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
507 aa  254  3e-66  Caulobacter sp. K31  Bacteria  normal  0.264745  normal  0.414024 
 
 
-
 
NC_009484  Acry_2387  methyl-accepting chemotaxis sensory transducer  33.73 
 
 
505 aa  251  2e-65  Acidiphilium cryptum JF-5  Bacteria  normal  0.0566767  n/a   
 
 
-
 
NC_011365  Gdia_1550  methyl-accepting chemotaxis sensory transducer  34.1 
 
 
531 aa  246  8e-64  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.483034  normal  0.19588 
 
 
-
 
NC_012850  Rleg_0071  methyl-accepting chemotaxis sensory transducer  34.36 
 
 
494 aa  229  1e-58  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0080  methyl-accepting chemotaxis sensory transducer  32.37 
 
 
510 aa  218  2e-55  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1430  methyl-accepting chemotaxis sensory transducer  33.18 
 
 
481 aa  199  1.0000000000000001e-49  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.105361  n/a   
 
 
-
 
NC_010338  Caul_4292  methyl-accepting chemotaxis sensory transducer  41.56 
 
 
535 aa  191  2.9999999999999997e-47  Caulobacter sp. K31  Bacteria  normal  normal  0.432431 
 
 
-
 
NC_010338  Caul_3214  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
532 aa  182  1e-44  Caulobacter sp. K31  Bacteria  normal  normal  0.409706 
 
 
-
 
NC_011989  Avi_1439  methyl-accepting chemotaxis protein  32.19 
 
 
504 aa  181  2.9999999999999997e-44  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2177  methyl-accepting chemotaxis sensory transducer  39.33 
 
 
602 aa  178  2e-43  Caulobacter sp. K31  Bacteria  normal  0.180362  normal  0.483778 
 
 
-
 
NC_010338  Caul_1141  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.67 
 
 
501 aa  177  4e-43  Caulobacter sp. K31  Bacteria  normal  0.489477  hitchhiker  0.000166409 
 
 
-
 
NC_012850  Rleg_0943  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.49 
 
 
793 aa  176  7e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.27721  normal 
 
 
-
 
NC_011368  Rleg2_5354  methyl-accepting chemotaxis sensory transducer  37.2 
 
 
714 aa  176  9.999999999999999e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.642158  normal  0.0994281 
 
 
-
 
NC_009484  Acry_2705  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
509 aa  176  9.999999999999999e-43  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0222  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
642 aa  175  1.9999999999999998e-42  Caulobacter sp. K31  Bacteria  normal  0.414219  normal  0.376796 
 
 
-
 
NC_009484  Acry_2144  methyl-accepting chemotaxis sensory transducer  36.97 
 
 
556 aa  174  5e-42  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0276  methyl-accepting chemotaxis sensory transducer  40.67 
 
 
657 aa  174  5e-42  Caulobacter sp. K31  Bacteria  normal  0.461968  normal  0.560518 
 
 
-
 
NC_011989  Avi_3729  methyl-accepting chemotaxis protein  38.21 
 
 
644 aa  174  5e-42  Agrobacterium vitis S4  Bacteria  normal  0.554142  n/a   
 
 
-
 
NC_012854  Rleg_6402  methyl-accepting chemotaxis sensory transducer  36.69 
 
 
688 aa  172  1e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.579482  normal  0.320846 
 
 
-
 
NC_010581  Bind_1798  methyl-accepting chemotaxis sensory transducer  39.86 
 
 
615 aa  172  2e-41  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.371991  normal 
 
 
-
 
NC_010581  Bind_3620  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
677 aa  172  2e-41  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0125911 
 
 
-
 
NC_010338  Caul_1355  methyl-accepting chemotaxis sensory transducer  37.97 
 
 
494 aa  171  2e-41  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1201  methyl-accepting chemotaxis protein  36.86 
 
 
728 aa  171  3e-41  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5069  methyl-accepting chemotaxis sensory transducer  38.97 
 
 
714 aa  171  4e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.277036  normal 
 
 
-
 
NC_010338  Caul_0236  methyl-accepting chemotaxis sensory transducer  39.32 
 
 
660 aa  170  6e-41  Caulobacter sp. K31  Bacteria  normal  0.105118  normal 
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
796 aa  169  9e-41  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_011989  Avi_2791  methyl-accepting chemotaxis protein  37.42 
 
 
622 aa  169  9e-41  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1159  methyl-accepting chemotaxis protein  37.83 
 
 
671 aa  169  1e-40  Agrobacterium vitis S4  Bacteria  normal  0.573311  n/a   
 
 
-
 
NC_011368  Rleg2_4524  methyl-accepting chemotaxis sensory transducer  39.86 
 
 
661 aa  169  1e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.66296 
 
 
-
 
NC_011989  Avi_0994  methyl-accepting chemotaxis protein  39.53 
 
 
649 aa  169  2e-40  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5255  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.56 
 
 
585 aa  168  2.9999999999999998e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.700683  normal 
 
 
-
 
NC_011988  Avi_5151  methyl-accepting chemotaxis protein  38.14 
 
 
776 aa  167  2.9999999999999998e-40  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1790  methyl-accepting chemotaxis sensory transducer  38.97 
 
 
694 aa  167  2.9999999999999998e-40  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  32.66 
 
 
778 aa  167  2.9999999999999998e-40  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_009636  Smed_2893  methyl-accepting chemotaxis sensory transducer  40.59 
 
 
589 aa  167  4e-40  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0052  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
778 aa  167  4e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0947231 
 
 
-
 
NC_011666  Msil_1449  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
647 aa  167  5e-40  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009636  Smed_1613  methyl-accepting chemotaxis sensory transducer  39.45 
 
 
603 aa  167  5.9999999999999996e-40  Sinorhizobium medicae WSM419  Bacteria  normal  0.183078  normal  0.160096 
 
 
-
 
NC_009484  Acry_2590  methyl-accepting chemotaxis sensory transducer  40.2 
 
 
642 aa  166  1.0000000000000001e-39  Acidiphilium cryptum JF-5  Bacteria  normal  0.156907  n/a   
 
 
-
 
NC_011369  Rleg2_0221  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.28 
 
 
785 aa  165  1.0000000000000001e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1117  methyl-accepting chemotaxis protein  35.67 
 
 
657 aa  165  2.0000000000000002e-39  Agrobacterium vitis S4  Bacteria  normal  0.593573  n/a   
 
 
-
 
NC_008043  TM1040_3209  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
782 aa  165  2.0000000000000002e-39  Ruegeria sp. TM1040  Bacteria  normal  0.684679  normal 
 
 
-
 
NC_011370  Rleg2_6126  methyl-accepting chemotaxis sensory transducer  36.91 
 
 
650 aa  165  2.0000000000000002e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.375381  normal  0.0878449 
 
 
-
 
NC_011369  Rleg2_0185  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
669 aa  164  3e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0537  methyl-accepting chemotaxis sensory transducer  38.81 
 
 
605 aa  164  3e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.180661 
 
 
-
 
NC_011369  Rleg2_0563  methyl-accepting chemotaxis sensory transducer  37.77 
 
 
645 aa  164  3e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.73856 
 
 
-
 
NC_011366  Rleg2_5896  methyl-accepting chemotaxis sensory transducer  40.35 
 
 
605 aa  164  3e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1547  methyl-accepting chemotaxis protein  35.29 
 
 
635 aa  164  4.0000000000000004e-39  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_011989  Avi_2927  methyl-accepting chemotaxis protein  36.99 
 
 
730 aa  164  4.0000000000000004e-39  Agrobacterium vitis S4  Bacteria  normal  0.0257741  n/a   
 
 
-
 
NC_009636  Smed_2051  methyl-accepting chemotaxis sensory transducer  39.52 
 
 
717 aa  164  4.0000000000000004e-39  Sinorhizobium medicae WSM419  Bacteria  normal  0.245091  normal  0.347836 
 
 
-
 
NC_009636  Smed_0489  methyl-accepting chemotaxis sensory transducer  36.83 
 
 
698 aa  163  6e-39  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.000832175  normal 
 
 
-
 
NC_011989  Avi_0958  methyl-accepting chemotaxis protein  40.26 
 
 
610 aa  163  9e-39  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0606  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
644 aa  163  9e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.307243 
 
 
-
 
NC_010335  Caul_5142  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
599 aa  162  1e-38  Caulobacter sp. K31  Bacteria  normal  0.367406  normal  0.838811 
 
 
-
 
NC_012848  Rleg_5166  methyl-accepting chemotaxis sensory transducer  37.06 
 
 
669 aa  162  1e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4978  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
846 aa  162  1e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.23325  normal 
 
 
-
 
NC_010338  Caul_1387  methyl-accepting chemotaxis sensory transducer  41.11 
 
 
615 aa  162  1e-38  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  38.18 
 
 
695 aa  161  2e-38  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1383  methyl-accepting chemotaxis sensory transducer  34.6 
 
 
705 aa  162  2e-38  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5535  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.44 
 
 
591 aa  161  2e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.435889 
 
 
-
 
NC_012850  Rleg_2464  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.13 
 
 
605 aa  161  2e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0580  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.89 
 
 
606 aa  161  2e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.237889  normal 
 
 
-
 
NC_011984  Avi_9088  methyl-accepting chemotaxis protein  35.74 
 
 
761 aa  161  3e-38  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0359  methyl-accepting chemotaxis sensory transducer  38.49 
 
 
927 aa  161  3e-38  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1200  methyl-accepting chemotaxis protein  35.86 
 
 
728 aa  161  3e-38  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2181  methyl-accepting chemotaxis sensory transducer  37.61 
 
 
606 aa  160  4e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.440189  normal  0.953277 
 
 
-
 
NC_011989  Avi_2775  methyl-accepting chemotaxis protein  37.93 
 
 
558 aa  161  4e-38  Agrobacterium vitis S4  Bacteria  normal  0.536477  n/a   
 
 
-
 
NC_008044  TM1040_0839  methyl-accepting chemotaxis sensory transducer  38.49 
 
 
927 aa  160  5e-38  Ruegeria sp. TM1040  Bacteria  normal  0.587759  normal  0.752939 
 
 
-
 
NC_008044  TM1040_0984  methyl-accepting chemotaxis sensory transducer  35.99 
 
 
608 aa  160  6e-38  Ruegeria sp. TM1040  Bacteria  normal  0.0666136  normal  0.983928 
 
 
-
 
NC_012850  Rleg_0581  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.19 
 
 
607 aa  160  7e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.893675 
 
 
-
 
NC_011369  Rleg2_0626  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.2 
 
 
726 aa  159  1e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4091  methyl-accepting chemotaxis protein  35.67 
 
 
592 aa  159  1e-37  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0640  methyl-accepting chemotaxis sensory transducer  38.06 
 
 
604 aa  159  1e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.122515  normal  0.297773 
 
 
-
 
NC_011989  Avi_2928  methyl-accepting chemotaxis protein  40.15 
 
 
792 aa  159  1e-37  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0214  methyl-accepting chemotaxis sensory transducer  36.61 
 
 
663 aa  158  2e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.287216 
 
 
-
 
NC_011989  Avi_0793  methyl-accepting chemotaxis protein  35.4 
 
 
740 aa  159  2e-37  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5296  methyl-accepting chemotaxis sensory transducer  36.64 
 
 
845 aa  158  2e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.706556  normal  0.0870205 
 
 
-
 
NC_011989  Avi_0806  methyl-accepting chemotaxis protein  37.5 
 
 
842 aa  157  4e-37  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0520  methyl-accepting chemotaxis sensory transducer  46.97 
 
 
636 aa  157  4e-37  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3177  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
749 aa  156  7e-37  Ruegeria sp. TM1040  Bacteria  normal  0.726311  normal 
 
 
-
 
NC_011368  Rleg2_4686  methyl-accepting chemotaxis sensory transducer  38.56 
 
 
601 aa  156  9e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.115608  normal 
 
 
-
 
NC_007493  RSP_2440  methyl accepting chemotaxis protein  39.8 
 
 
770 aa  155  1e-36  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1208  methyl-accepting chemotaxis protein  38.8 
 
 
604 aa  156  1e-36  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0697  methyl-accepting chemotaxis sensory transducer  37.02 
 
 
610 aa  155  1e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4945  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
635 aa  156  1e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_2608  methyl-accepting chemotaxis protein  34.23 
 
 
655 aa  155  1e-36  Agrobacterium vitis S4  Bacteria  normal  0.445883  n/a   
 
 
-
 
NC_008043  TM1040_3194  methyl-accepting chemotaxis sensory transducer  36.55 
 
 
614 aa  155  2e-36  Ruegeria sp. TM1040  Bacteria  normal  0.311641  normal 
 
 
-
 
NC_008044  TM1040_2453  methyl-accepting chemotaxis sensory transducer  38.44 
 
 
788 aa  155  2e-36  Ruegeria sp. TM1040  Bacteria  normal  0.925334  normal  0.122382 
 
 
-
 
NC_011989  Avi_3647  methyl-accepting chemotaxis protein  36.42 
 
 
680 aa  155  2e-36  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_3048  methyl-accepting chemotaxis sensory transducer  38.43 
 
 
601 aa  154  2.9999999999999998e-36  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.229221  n/a   
 
 
-
 
NC_011988  Avi_5554  methyl-accepting chemotaxis protein  34.78 
 
 
653 aa  154  2.9999999999999998e-36  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_010338  Caul_1640  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
600 aa  154  4e-36  Caulobacter sp. K31  Bacteria  normal  0.0736059  normal  0.0470065 
 
 
-
 
NC_009049  Rsph17029_1104  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
792 aa  154  4e-36  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2990  methyl-accepting chemotaxis sensory transducer  50 
 
 
631 aa  154  5e-36  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0452  methyl-accepting chemotaxis protein  31.48 
 
 
622 aa  154  5e-36  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
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