| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1439 |
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| Symbol | mcpV |
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| ID | 7386419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1211890 |
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| End bp | 1213404 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650827 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002549032 |
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| Protein GI | 222148075 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATG CAACCGATGA CAATGGCGAA CTTCACAAGC GAATGGCTTT CCTCAAGCTG
ACGGCAAGCG ATCTGCAGGT CGTCGCCGGC TTGCAGCCGA TCATTGCCCA TTCCATCGGT
CCGACGCTGG ACGTATTCTA TCAAACCGCC AAACAGCATC CGGAAGCGGC GAAGTTCTTT
TCCAGCGACA GCCATATCGA ACATGCCAAA CAGAAACAGA TCAAGCATTG GAGCCATCTG
CTTTCCGGCC ATCTGGATGG CGCTTATGTT GCCTCGGCAA CCACGATTGG CCGCACCCAT
GCAAAGCTGG GCCTTGACCC GCGCTGGTAT ATCGACGGCT ATGGCCTGAT TCTCTCAGGC
CTGGTCACCG GCGTGCTGGA AGCAGAGATG CGCGGAACCC TGTTCGGCAG CCGATTGAAA
GGCGCCATTC CGAAGATCTC CGCGCTGATC CGCGCCACGA TGCTGGATAT GGATTTCGCC
ATTTCCACCT ATGGTGAAGC ATTGAGCGAG GAGCGCAGCA AAATTGCCGC GGAGCGCGCC
AGAATCGAAG AAGAACAGCA ACAGGCTCTG AGCGCCCTGG ACAATGCATT GGCAGCGCTC
AGCAACGGCA ATTTGACAGC ACAGATCACC ACGCCGCTTG CGCCACAATA CGAGGCCTTG
CGCGGCAATT TCAACAAGGC CGTCGCCACC CTGGCGGGCG CTTTCGACGA AATCAGCCAC
GAGGCAGGCC AGGTCAATGC CAATACCCGG GAACTGACCC GGGCAACCGA CGACATGGCA
AAGCGCACCG AACAGCAGGC CGCCGCCCTT GAAGAGACGG CTGCGGCGCT GGAGGAAATC
AGCGTGATTG CCAAGCAATC GGCGCAGCGC AGCCGGGAAG CCCAGACGGT GGCCAGCCAT
GCCGCAGAGG CCGCCGGCAA ATCCGGCGAG ATCATCGGCA ATGCGGTCGC GGCCATGAGC
GCTATCGAGG ACAGCTCGAC GAAGATTTCC TCGATTATCA GCGTCATCGA CGAAATTTCC
TTCCAGACCA ACCTGCTGGC GCTGAATGCC GGGGTGGAAG CCGCGCGGGC GGGCGAGGCA
GGCAAGGGTT TCGCAGTCGT GGCCCAGGAA GTGCGTGAAC TGGCACAGCG CTCCGCCAAT
GCCGCCAAGG AAATCAAGAC GCTGATCGAC CGCTCGTCGA AAGACGTCGC CAATGGCGTG
GCCCTGGTCA ACCAGACCGG CGACGTCTTG CGCACCATCA GCGATCAGGT TCGTGAAGTG
GACGGACATA TTGCCGCCAT AGCCCAGGCC GCCCAGGAAC AGGCATCCGG CATGAATGAA
ATCAATGCTG CTATCTCGAG CATGGATCAG TTGACCCAGC AGAATGCCTC GATGGTGGAG
GAAACCAACG CCTCAACCCA TACGCTGCAA GGCGTATCCG ACCATCTGGC ATCACTGCTG
GCCCGTTTCC AGACGCAAGG GACGAAGGCG CATACGCCGC GGTCCGGGGC CTATCACCAG
CGCTACGCGG CCTGA
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| Protein sequence | MTNATDDNGE LHKRMAFLKL TASDLQVVAG LQPIIAHSIG PTLDVFYQTA KQHPEAAKFF
SSDSHIEHAK QKQIKHWSHL LSGHLDGAYV ASATTIGRTH AKLGLDPRWY IDGYGLILSG
LVTGVLEAEM RGTLFGSRLK GAIPKISALI RATMLDMDFA ISTYGEALSE ERSKIAAERA
RIEEEQQQAL SALDNALAAL SNGNLTAQIT TPLAPQYEAL RGNFNKAVAT LAGAFDEISH
EAGQVNANTR ELTRATDDMA KRTEQQAAAL EETAAALEEI SVIAKQSAQR SREAQTVASH
AAEAAGKSGE IIGNAVAAMS AIEDSSTKIS SIISVIDEIS FQTNLLALNA GVEAARAGEA
GKGFAVVAQE VRELAQRSAN AAKEIKTLID RSSKDVANGV ALVNQTGDVL RTISDQVREV
DGHIAAIAQA AQEQASGMNE INAAISSMDQ LTQQNASMVE ETNASTHTLQ GVSDHLASLL
ARFQTQGTKA HTPRSGAYHQ RYAA
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