Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4081 |
Symbol | |
ID | 7388882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3431418 |
End bp | 3433088 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643652790 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_002550963 |
Protein GI | 222150006 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGTTCGAC AGGGCCGACC CCGCGGGGAT TGGCAATTGG TTCAGCACGC TGAGGCAGAA CGGACAGGTG GATCGCAGGC TGGCAGCTTG CGGGACCGGC TGAATTTTGC CGGCCTGGAC CAGGATGCTT GCAGTCTTTT GCGACGCCAC CGGGTTGGGC TGGAGACTGA CGTGGAAACG GGTCTGCACG CGTTTTTTCG CAAGTTGCAG ACGGCACCCG ATGCGGCCCG CCAGTTTACC GGCGAGCGGC AGATCGACCG CCTCCATGAT CTCTATGTTT CCCATTGGGA CGTGATGACC GACGCGCGTT TCGATGCGCT CTATGCCGAA CGTGTCAAAG TGCTGGCTGA TAGCCAAAGC CGGATGGGGC TTGATCCCCG TTGGCAGATT GCCGGCCATG CCGTTGTTCT GGAGGGCCTG GTCAGTTCCG TCTTCGCCGA TCTTGCCAAT CGCGGTTTCA TGCCGTCCTC GCGCAAGCGG GCAGCCGAAT TGCAGGCGCT GGTCAGCGCG CTCATTCGCC TGGTCATGGT GGATGTGGAG ATTGCCGTTT CCCTGCGCTT CAACGAATTG CGCCTCAAGC ATCATCGCGA CATGGCCGAC CTGCGGCGTA AGGAGCGCGC CAGCGTCACG GATCTGTTCC AAGGCGCATT CACGGCGCTG TCGCAGGGCG ATCTGTCCAG CCGGCTGAAC AGTGATGTCC CCGAGGAATA TCAGGATCTC GTGTCGAGTT TCAATGGCGC GATGGAGAGC ATTTGCGCTG CGGTTTCCGT GATGGACGCC AGCCGCCGCA CGGCGGAGGA CGTCAGCGCT GCCCTTGGCG AGCAAGGATC CGCGCTGGGT GTGCGGGCCG ATGAGGCCGC AGCGGGCCTT GATGCGGCAA GTGCCAGCCT GCGGCAGGTG ACCGAAACAG TCAGCCATAA CGCGGCGCAG TCGAAACTCA CCGAGCAGGC TGTCGAGATG ACCGTCAAGG CGGTCGAAGC GAGCGGCGAG GTGGTTGGTA AGGCCATCGC CGCCATGGCG GATATCGAAA CCTCCGCCGA GCAGATCGGC CATATTATCG GCTCCATCGA TGAAATTGCC TTCCAGACCA ACCTTCTGGC CTTGAACGCC GGCATCGAGG CGGCTCGCGC CGGTGATTCT GGTCGGGGCT TTGCCGTCGT TGCCCAGGAA GTACGGGCTT TGGCCCAGCG GTCCGCCGAC AGTGCGCGTG AAATCAAGGC TCTGGTTGCG GCCACCAAGC ATCAGGTCGA GGCCGGGGTG GAGATGGTCA ATCGCACCCA GGATGCGATT TCCAGCATCG TGACGCAGGT GGTCGATATC AATCGGTCGG TCTCGGTGAT GGCTGGCGAG ACGGCCAAGC AGGCCGCAGC CCTGGATAGC GTCGCTTGCG TGCTCGAAGC CCAGGGCGAA ACATCGCGTG CAAGCGCACA GTTGTCACGT CAGGCTGCGG ATGACAGTGC CGATCTGCAT ACGGTGATCG TCGAGCTTGG CAAGACCGTG CGGCAATTCA CCATTGAGCG CACGCACTAT CGGGGCAGCC AGACCAATCC GTCGAACGGT TATCCGGTGT CATCAGCGCA AACGGCAGAG CTGCCGATGG CGGCTTTTTC CGAGGACTTC GGGGGGCACG ATTTTTTAGT GCCGATTCGG GCAGGAGGCC TTTCGATGTG A
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Protein sequence | MVRQGRPRGD WQLVQHAEAE RTGGSQAGSL RDRLNFAGLD QDACSLLRRH RVGLETDVET GLHAFFRKLQ TAPDAARQFT GERQIDRLHD LYVSHWDVMT DARFDALYAE RVKVLADSQS RMGLDPRWQI AGHAVVLEGL VSSVFADLAN RGFMPSSRKR AAELQALVSA LIRLVMVDVE IAVSLRFNEL RLKHHRDMAD LRRKERASVT DLFQGAFTAL SQGDLSSRLN SDVPEEYQDL VSSFNGAMES ICAAVSVMDA SRRTAEDVSA ALGEQGSALG VRADEAAAGL DAASASLRQV TETVSHNAAQ SKLTEQAVEM TVKAVEASGE VVGKAIAAMA DIETSAEQIG HIIGSIDEIA FQTNLLALNA GIEAARAGDS GRGFAVVAQE VRALAQRSAD SAREIKALVA ATKHQVEAGV EMVNRTQDAI SSIVTQVVDI NRSVSVMAGE TAKQAAALDS VACVLEAQGE TSRASAQLSR QAADDSADLH TVIVELGKTV RQFTIERTHY RGSQTNPSNG YPVSSAQTAE LPMAAFSEDF GGHDFLVPIR AGGLSM
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