Gene MCA1661 details

Gene Information

• Locus tag: MCA1661
• ID: 3102184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 1763806
• End bp: 1765674
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637170823
• Product: methyl-accepting chemotaxis protein, putative
• Protein accession: YP_114104
• Protein GI: 53804249
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.325051
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCATCG CCCTTTCCAA GGCCGAGGAC GTCGAAACCT ATGCTTATGA GCGGATACGG 
GCTGCAGTGG TGCTGCGCAA CGACCGTTAT CTGGTCTCTT CGATCAACGC CTTGCAGAAG 
TACCGGCGCG AACCGGGACG CTACGCCAGG GAACTTCAGG CATTCGATGG AGAGATACGT 
CCCGTGCTGG ACTTCATGAT CGAAAATCTC GCTTTCAGGA ATCTGATCGC CTTCGATCCG 
CGTGGGGAGG TTCTGTACCA GTCGCATCCG GTCCAGCAGC TCGGGAACAA CCTCTTTGAA 
GGTTTGCTGA AGGAGTCACC GCTGGCCAAA GCAGTGCTGC ACGCCACCAC CTTGCTCGAT 
GCCGAAATCT CCGATTTCGG CGCCTATCCG GGGGGCGATA AACCGGTGGG ATACGTCGTG 
ACGCCACTGT TCGACAGCGG GGGAGAACTC GTCGCCATCA TCGCCCTGCA GCTGGATACG 
GACGAGGTGT TCGCGCCGTT CCTGGACTAC AGCGGCCTGG GAAACACCGG GCAGACCATC 
GTGGGCCTCC TCGACCACAA CGAGATACGC ATCATTTCAC CGCTGAGGAA CCAGCCCGAC 
GCGGCGCAGA AACTCCGTAT CCAGATGGGG GACAGTCAAG GCCAAGGCAT CCAGAAAGCC 
GTCCTCGGAA ATCGTGACTT CGGTGAAATC CCAGGGATAT TCAAGGAGCC GGTGCTAGCG 
AGCTGGACCT ATCTCCCGTC CTTCCGCTGG GGCCTCTCGG TGCAGATGGA CGTGGGCGAA 
GCCTTGGCCC TGGTGGATAC CCAGCGCCTG GTCAACGGCG GGCTGCTGGC GCTGCTGCTG 
ATTCCCACCG CCCTGGCGGC GTCTCTGGTC TCGCGTACCA TCTCGCGCCC GGTGGGCGAA 
GCCATTGCCG CCGCCGAGAC GGTCGCCGCC GGCGACCTGA CGGCGAACCT CGACAGCGAC 
CGGAACGACG AAACCGGCAA GCTGCTCCGG GCTCTGGGGC GGATGACGTC CTATCTCAAT 
TCGCTGGTCG GACAGGTGCA GAAATCGATC ATCGAGCTGG TGTCGACTTC CAATACGCTG 
ACGGCGATGA ACCGGGCCCA GGAGGAGGAC ATATCGGCTT TCGGTGCGAC TACGAATCAG 
ATCGCCGCGG CCTCGCGGGA AATTTCGGCG ACCTCGGAGG AGCTGTTGCG CACCATGGCG 
GATGTGACGC GCATGGCCGG GAGTACGGCC GAGATGGCGA ACGCCGGACG GAACGAACTG 
ACCGACATGG AACAGGTGAT GCATACCCTG GCCGAGTCCA CCGGTTCCAT CGCCGACAAG 
CTCAATGCGA TCAGCGCGCG TGCGAGCGAT ATTTCCGCCA TGACCACCAC TATCAAGCGG 
GTGGCTGAAC AAACCAATCT CCTGTCGCTC AACGCCTCGA TCGAGGCCGA GAAAGCCGGA 
GAGTTCGGCC TAGGATTCTC CGTCGTCGCC CGCGAGATCC GCCGCCTCGC CGATCAGACT 
GCCGTGGCCA CGCTGGACAT CGAGACCGTG GTGCGGGAGA TGCATGCCGC AGTATCGATC 
GGGGTCATGG AAATGGACAA GTTTTCGGAG CAGGTCCGGC GGGGGGTCGA CGAGACCCGC 
CGGATCAGTC AACAATTTTC CCGAATCATC GAACAGGTGG GGGAGCTGAC GCCCCGCTTC 
GACGCCGTGC ACGAAGGCAT GCGCTCGCAG TCGGCCGGCG CGCTCCAGAT TCGCGACGCC 
ATGGTGGCCT TGTCGGAGAG TGCGATGCAG TCCGCACGGG CATTGGAAGA AACCAACCGG 
GCCTCCCAGC GGCTGGAAAC GGCGATCGCT GAGCTACGCA AGGAAATCGC CATTTTCCGC 
TTGTCGTGA 

 

Protein sequence

MFIALSKAED VETYAYERIR AAVVLRNDRY LVSSINALQK YRREPGRYAR ELQAFDGEIR 
PVLDFMIENL AFRNLIAFDP RGEVLYQSHP VQQLGNNLFE GLLKESPLAK AVLHATTLLD 
AEISDFGAYP GGDKPVGYVV TPLFDSGGEL VAIIALQLDT DEVFAPFLDY SGLGNTGQTI 
VGLLDHNEIR IISPLRNQPD AAQKLRIQMG DSQGQGIQKA VLGNRDFGEI PGIFKEPVLA 
SWTYLPSFRW GLSVQMDVGE ALALVDTQRL VNGGLLALLL IPTALAASLV SRTISRPVGE 
AIAAAETVAA GDLTANLDSD RNDETGKLLR ALGRMTSYLN SLVGQVQKSI IELVSTSNTL 
TAMNRAQEED ISAFGATTNQ IAAASREISA TSEELLRTMA DVTRMAGSTA EMANAGRNEL 
TDMEQVMHTL AESTGSIADK LNAISARASD ISAMTTTIKR VAEQTNLLSL NASIEAEKAG 
EFGLGFSVVA REIRRLADQT AVATLDIETV VREMHAAVSI GVMEMDKFSE QVRRGVDETR 
RISQQFSRII EQVGELTPRF DAVHEGMRSQ SAGALQIRDA MVALSESAMQ SARALEETNR 
ASQRLETAIA ELRKEIAIFR LS