Gene Oter_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2936 
Symbol 
ID6204295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp3762820 
End bp3764928 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content66% 
IMG OID641692601 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001819817 
Protein GI182414751 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.734876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAT CAACGTCCAC CAACCCCGCG GCGATTCGCT CGCGGAAACC CAAGGATCCC 
GCGCATGATG CCACCGAGTC GCGCGACACG ATGGCGCGTC GGATGCACAG CGGCGCGGCG
TCGCAGGTCG TGTCCGTCGA CACGGCGGCG GCTCAAGCCG GAGAGATGGC GCGGTCGCTC
AAGCAAACAG CGACCCAGGC GCTCTCGTTG ACCCGCTCAA CGGAAGATAC CGCGGCGTCG
CTGAACGAAA TGGCGGCGTC CATTGAAGAG GTGACTGCGA ACACCGGCGA GGTGGCAGCA
GCCGCCGCGC AGACCAGCGT GGCGATGAAG CAAATCGCCA CGGCGACGCA ATCGGTGACG
GCGACCTCCC AGGAGATGGC GACCTCTGCC GAAGAACTGA CAACGGCCGT TGCCGAAGTG
GCGGCCTCGG CAAAACGGGT GACGAGGGAC TCGGAGGATC TCGCTTCGGG ATTGAGCCAA
ACGGCAGCCT CGATGGAGCA GATGGGCCGC TCGGTCCAGG GCGTGGCGCG CAACGCGGAT
GACCTCACGG CCGCGGCCGA GGAAACGCTG TCCTCGATGA ACGAGATGGC CGCGTCGATC
GAAGAGGTCG CCGCCATGGC GGAAGGCATG GCGACTTCGG TCGAGGAAAC GTCGACCTCG
GTGGAGGAGT TGGCCCGCTC GATTCAATCG GTGGCCCAAA ACGCGGAGCG GATCACGGAG
GCGGCGAACA ACGCCAACAC GAGTGCCGTG CAGATGGATC GTTCCAGCCG CTCCGTGGCG
GACTCGGTGA AACGGACTCA GGAGATCGCC GCGAGAACCT CGCGCGAGGC GGAGGAGGGC
GGACAGATGA TCCGGCGCTC CGTCGAAGGG ATCGGACGAG TGGCGAGAGC GATGGACAAC
TCGACGGTCG TGATGCGCGA GTTGAACAAC CAGACCTCAA AAATCGGCAC CATCGTCGAC
ACGATCAATG TGATCTCCGA ACGGACCAAT CTTCTGTCGC TGAACGCCTC GATCGAGGCG
GCGCGAGCAG GGGATGCGGG CCGGGGGTTT GCGGTGGTTG CCGAGGAGAT TCGCAATCTG
GCCGAGCGCG CGGCCAAGGC GACGGCGGAC ATCGCCGACA TCGTGCGCAA TCTCGAGAAC
GTGACCCGTG AGGCCACGCA GGTGTCGACG GATGGCGCGC GACTGGCCGA GGAGTCGAAC
AGGCTCTCGG AAAGCGGACT ATCGGGCCTG CAGCGGATTT TGGAAGGCGT GCGCGAGAAC
ACCACGGTCG TGGCGGAAAT CAGCCGCGCC GCGGACGAGC AACTGTTGTC CAGCCGGCAC
GTGATGGAGG CGATCGCCGT GACGGCCGCG CAGGCGCGGC AGGTGGCCGG CGCGACGGCC
GAGCAGGCGA AAGGTGCCGG CTCCATCGTG CAAGCCGCGG CGCAAATGCG GAAGGTCACG
AAAGAGGTTT CGCAGGCCAT GGCCGAACAC GGTCGCGCCG CGCGCGAGGT CGTGAAGGCC
GCGCAGAGCA CCAGCGGCAT CGCCGTGCAG CTGCGGAAAG CGACTGGTGA GCAGGCGACC
GGGACTGGTC AGGTCGTCGC GGCGATCGAG GCGATGCGCA AGAGCGGCGC GTCGACGTCG
CGCGCGATGG CGGAGCAGGC GACTGCCTCG GATCAGATCG CGAAGGAGGC CGAGCGGCTC
GGCAAGCTGG TCACGACGGT GAATCGAACC ATGAGCGAGC AGGCCACGGC GACCGGTCAG
GTCGCCATGG CGGGCGAAAG TTTGCGCACG CAGTCTGAAC AGGCCGCGCG TGGACTGCAG
GAGCAGTCGC GCGCGATGCG GGACCTCACG AAAGCGAGCG AGAACATCGC GGCGCAGATC
AAGTCGATCA CCGAGGCTAA CCTGCAGCAC TCCGCGGCAG CCGAATCAGT GATGACGAGC
CTGATAGAAA TCAGGAGCGT GGCGACGCAA ACGGGATTGG ACGCGAACAC TTGGAACGCC
CCGGAGGACG TTTCTGGCCC GCAACCCCGG CCCAGATCTG CCTCGCGACG CAAAGCCGGC
GCGACATCGG AGAAAAACAC TCCGGCTGAG CCGAACGGCG AGCCCGCAAA CGGTTCCAAG
GCGCAATGA
 
Protein sequence
MAKSTSTNPA AIRSRKPKDP AHDATESRDT MARRMHSGAA SQVVSVDTAA AQAGEMARSL 
KQTATQALSL TRSTEDTAAS LNEMAASIEE VTANTGEVAA AAAQTSVAMK QIATATQSVT
ATSQEMATSA EELTTAVAEV AASAKRVTRD SEDLASGLSQ TAASMEQMGR SVQGVARNAD
DLTAAAEETL SSMNEMAASI EEVAAMAEGM ATSVEETSTS VEELARSIQS VAQNAERITE
AANNANTSAV QMDRSSRSVA DSVKRTQEIA ARTSREAEEG GQMIRRSVEG IGRVARAMDN
STVVMRELNN QTSKIGTIVD TINVISERTN LLSLNASIEA ARAGDAGRGF AVVAEEIRNL
AERAAKATAD IADIVRNLEN VTREATQVST DGARLAEESN RLSESGLSGL QRILEGVREN
TTVVAEISRA ADEQLLSSRH VMEAIAVTAA QARQVAGATA EQAKGAGSIV QAAAQMRKVT
KEVSQAMAEH GRAAREVVKA AQSTSGIAVQ LRKATGEQAT GTGQVVAAIE AMRKSGASTS
RAMAEQATAS DQIAKEAERL GKLVTTVNRT MSEQATATGQ VAMAGESLRT QSEQAARGLQ
EQSRAMRDLT KASENIAAQI KSITEANLQH SAAAESVMTS LIEIRSVATQ TGLDANTWNA
PEDVSGPQPR PRSASRRKAG ATSEKNTPAE PNGEPANGSK AQ