More than 300 homologs were found in PanDaTox collection
for query gene Rru_A1583 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A1583  chemotaxis sensory transducer  100 
 
 
583 aa  1164    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.105257  n/a   
 
 
-
 
NC_007643  Rru_A1584  chemotaxis sensory transducer  90.47 
 
 
556 aa  973    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.596272  n/a   
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  37.63 
 
 
561 aa  323  4e-87  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
573 aa  318  1e-85  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
560 aa  315  1.9999999999999998e-84  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
561 aa  310  6.999999999999999e-83  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  37.52 
 
 
566 aa  306  6e-82  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  36.16 
 
 
561 aa  295  1e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  36.67 
 
 
561 aa  293  5e-78  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
586 aa  293  6e-78  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_011004  Rpal_4788  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
561 aa  290  5.0000000000000004e-77  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
567 aa  289  1e-76  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007643  Rru_A2366  methyl-accepting chemotaxis sensory transducer  36.53 
 
 
560 aa  285  1.0000000000000001e-75  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196109  n/a   
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  35.26 
 
 
565 aa  285  2.0000000000000002e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  34.41 
 
 
559 aa  281  2e-74  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1048  methyl-accepting chemotaxis sensory transducer  36.55 
 
 
559 aa  281  3e-74  Methylobacterium populi BJ001  Bacteria  normal  normal  0.165383 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  36 
 
 
565 aa  268  2e-70  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  35.76 
 
 
563 aa  267  2.9999999999999995e-70  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  33.88 
 
 
563 aa  266  7e-70  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_007925  RPC_4105  methyl-accepting chemotaxis sensory transducer  35.06 
 
 
561 aa  264  4e-69  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.916882  normal 
 
 
-
 
NC_009485  BBta_6950  putative methyl-accepting chemotaxis receptor/sensory transducer  34.67 
 
 
661 aa  256  7e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  32.73 
 
 
608 aa  253  7e-66  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_010725  Mpop_0741  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
558 aa  251  2e-65  Methylobacterium populi BJ001  Bacteria  normal  0.532986  normal 
 
 
-
 
NC_007643  Rru_A0632  chemotaxis sensory transducer  34.35 
 
 
736 aa  250  5e-65  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.180969  n/a   
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.27 
 
 
558 aa  249  1e-64  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_007925  RPC_1253  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
567 aa  248  3e-64  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.010155 
 
 
-
 
NC_007643  Rru_A2460  chemotaxis sensory transducer  33.33 
 
 
565 aa  246  6.999999999999999e-64  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1766  methyl-accepting chemotaxis sensory transducer  34.73 
 
 
575 aa  245  1.9999999999999999e-63  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3836  Cache, type 2  33.58 
 
 
661 aa  241  2.9999999999999997e-62  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.337162  normal 
 
 
-
 
NC_009485  BBta_7375  methyl-accepting chemotaxis sensory transducer  40.92 
 
 
655 aa  227  4e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1109  chemotaxis sensory transducer  35.69 
 
 
566 aa  225  2e-57  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1977  methyl-accepting chemotaxis sensory transducer  42.56 
 
 
651 aa  223  8e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.064764  normal 
 
 
-
 
NC_007643  Rru_A2546  chemotaxis sensory transducer  40.82 
 
 
690 aa  222  1.9999999999999999e-56  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4561  methyl-accepting chemotaxis sensory transducer  41.11 
 
 
711 aa  221  3.9999999999999997e-56  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3409  chemotaxis sensory transducer  42.26 
 
 
651 aa  218  2e-55  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.304746  normal 
 
 
-
 
NC_011004  Rpal_0924  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
712 aa  218  2.9999999999999998e-55  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.991242  n/a   
 
 
-
 
NC_010505  Mrad2831_1828  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
579 aa  217  4e-55  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0132835 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
562 aa  217  5.9999999999999996e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_010511  M446_4388  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
553 aa  216  5.9999999999999996e-55  Methylobacterium sp. 4-46  Bacteria  normal  0.789001  normal 
 
 
-
 
NC_010511  M446_2091  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
562 aa  215  1.9999999999999998e-54  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0245477 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  33.28 
 
 
566 aa  214  2.9999999999999995e-54  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
562 aa  214  4.9999999999999996e-54  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_007958  RPD_0840  chemotaxis sensory transducer  40.52 
 
 
712 aa  214  4.9999999999999996e-54  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.174635 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  39 
 
 
689 aa  213  7e-54  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  38.5 
 
 
694 aa  213  1e-53  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4064  methyl-accepting chemotaxis sensory transducer  41.26 
 
 
651 aa  212  2e-53  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  38.89 
 
 
688 aa  212  2e-53  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  38.33 
 
 
688 aa  211  2e-53  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  41.07 
 
 
562 aa  211  3e-53  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  41.03 
 
 
562 aa  211  4e-53  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  37.87 
 
 
688 aa  210  5e-53  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_009485  BBta_0865  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
712 aa  210  5e-53  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.163995 
 
 
-
 
NC_010511  M446_2738  methyl-accepting chemotaxis sensory transducer  32.78 
 
 
562 aa  209  9e-53  Methylobacterium sp. 4-46  Bacteria  normal  0.809654  normal  0.020868 
 
 
-
 
NC_007925  RPC_3476  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
641 aa  209  1e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.640734  normal 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  40.77 
 
 
562 aa  209  1e-52  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_009485  BBta_7506  putative methyl-accepting chemotaxis protein  39.03 
 
 
671 aa  208  2e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  37.17 
 
 
565 aa  208  2e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
566 aa  208  2e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
656 aa  207  3e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  38.07 
 
 
565 aa  207  5e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007643  Rru_A1408  chemotaxis sensory transducer  39.94 
 
 
568 aa  206  8e-52  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.591131  n/a   
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  38.72 
 
 
688 aa  204  2e-51  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  37.53 
 
 
688 aa  204  3e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  40.11 
 
 
688 aa  204  4e-51  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
689 aa  204  4e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_007643  Rru_A2076  chemotaxis sensory transducer  37.94 
 
 
561 aa  203  5e-51  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_007643  Rru_A0568  chemotaxis sensory transducer  39.55 
 
 
662 aa  203  9e-51  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  39.19 
 
 
566 aa  202  9.999999999999999e-51  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0383  methyl-accepting chemotaxis sensory transducer  41.26 
 
 
559 aa  201  1.9999999999999998e-50  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.50218 
 
 
-
 
NC_007925  RPC_3475  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
649 aa  201  1.9999999999999998e-50  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  37.7 
 
 
741 aa  202  1.9999999999999998e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
567 aa  200  5e-50  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  35.87 
 
 
561 aa  200  7e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_010505  Mrad2831_0496  methyl-accepting chemotaxis sensory transducer  42.65 
 
 
838 aa  199  9e-50  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.421547 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
562 aa  199  1.0000000000000001e-49  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  38.94 
 
 
563 aa  199  1.0000000000000001e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  36.56 
 
 
656 aa  199  1.0000000000000001e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  39.76 
 
 
552 aa  198  2.0000000000000003e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  39.6 
 
 
561 aa  198  2.0000000000000003e-49  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  36.07 
 
 
656 aa  198  2.0000000000000003e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  35.37 
 
 
542 aa  198  3e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  40.92 
 
 
561 aa  197  3e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  38.96 
 
 
563 aa  197  3e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  38.5 
 
 
556 aa  197  4.0000000000000005e-49  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  38.12 
 
 
681 aa  197  4.0000000000000005e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2544  methyl-accepting chemotaxis sensory transducer  41.84 
 
 
566 aa  197  4.0000000000000005e-49  Methylobacterium sp. 4-46  Bacteria  normal  0.476321  normal 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
561 aa  197  5.000000000000001e-49  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  34.92 
 
 
730 aa  197  5.000000000000001e-49  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2554  methyl-accepting chemotaxis sensory transducer  36.06 
 
 
644 aa  197  5.000000000000001e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0186678  n/a   
 
 
-
 
NC_009485  BBta_0533  methyl-accepting chemotaxis protein (MCP)  38.01 
 
 
712 aa  197  6e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.595703 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  36.59 
 
 
676 aa  196  1e-48  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
561 aa  196  1e-48  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  38.5 
 
 
556 aa  196  1e-48  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  37.2 
 
 
563 aa  196  1e-48  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  36.79 
 
 
577 aa  196  1e-48  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  38.48 
 
 
675 aa  195  2e-48  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_010725  Mpop_4549  methyl-accepting chemotaxis sensory transducer  41.56 
 
 
561 aa  194  4e-48  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
563 aa  194  5e-48  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1739  chemotaxis sensory transducer  41.45 
 
 
559 aa  193  6e-48  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  37.3 
 
 
563 aa  192  1e-47  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
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