| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1583 |
|---|
| Symbol | |
|---|
| ID | 3835000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1865409 |
|---|
| End bp | 1867160 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637825675 |
|---|
| Product | chemotaxis sensory transducer |
|---|
| Protein accession | YP_426670 |
|---|
| Protein GI | 83592918 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.105257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGGT TGCATCCTCG GGGAAAACGG CAGAGATTCG TTGAGTGGAT TAAAAGACGT
AAGAAGACTG CGGATACCCC GATGCTTCGC AACAAACGTG TTGTCGTCAA GATTTCGGTT
ATCGTCGCCA TCATGGGACT CGCGCTGTGC GTGACCGTCG GCTGGCTGCT TAAGTCTCAA
TACGACGCCC TTCTCGATGA GCGGGTGACT CAGACGCGGG TGCTGACCGA GGCCGCCGTC
GGGGTCGCGA CCAAGCTGCA GGCCGAGGTT TCCGCCGGGA GGCTCACCCG CGATCAGGCG
ATCGAGACCT GGAAGACCGC GCTCAATGGC ATGACCTATG GGGACAATGG CTATCTCTTC
GCCTATGCCG TGGACGGTAT CAATCTGGTT CTGCCGCCGC GTCCCGATCT GGTCGGCAAG
CCCGTCGTCG ATCGGGGGGC CTTTCTCGCC CTTCAGGCGG CGGCGACGCG GGGGCCGGGC
GGCGGGCGGC TTGATTATGT CTGGCCCCGG GTCAAAGGGG GGCCGCCCAT CCCCAAGGTG
AGTTGGGCGA TGGAGATTAA AGCCTGGGGC GCCCTGGTGG GGACGGGGAT CTTTGTCGAC
GATGTCCAGG CGATTTTCTG GGCGAAACTG CGCGAGGCGA TGCTGATCGG CGGCCTGTTG
AGCGCGGTCG CCATCGTGCT GGTCTCGCTA ATTTCCCGCG ACCTTTCGGC GGTTCTCGGC
GATATCGCCC AGCGCATGGC GCTGATTTCC GGCGGACAGG TCGATATCGC CGTGCCCAAC
CAGGATCGGC GCGACGAGGC CGGAGCCATG GCGCGCTCCC TTGAGGTCTT TCGCGGCAAA
GTCGCCGAGA CCGAGCACCT GCGCGGCGAT CAGGAACGCC TCAAGGCCTC GGCCGAAGCG
GCGCGCAAGG CCAGTCTGGT CGAGTTGGCC AAGCGCTTCG AGGACTCGGT CAATAGCGTG
GCCCAGGCGG TCGCCAAAGG GGCGCGGACG ATGGACGAAA ACGCCAGGAC GATGTTCGGC
TTGGCCAATG TCACCCGCGA GAAGGCCAGC GATTCTTCGG TGATGAGCGA GCGCACCAAC
GCCAACTTCC AAACGGTGGC CTCGGCGTCG GAACAACTCT CGGCCTCGAT CCGCGAAATC
GCCAACCAGA CCGACAAGGC GCGGGTCACC AGCCAGCAGG CGGTGGAAAC CGCCGATCAA
TCGGCCGATC GCATGGCCGG GCTGGTCAGC GACGCCGAAA AGATCGGCGC GGTGATCACC
CTGATCGAGG CTATCGCCAG CCAGACCAAC CTGCTGGCGC TAAACGCCAC GATCGAAGCG
GCGCGGGCCG GCGACGCCGG CAAGGGTTTC GCCGTGGTCG CCCATGAGGT CAAGAACCTG
TCGACCCAGA CCCGCAAGGC GACCGAGGAC ATTCGGGGCC AGATCGAACG GGTCCGCGCC
TCGGTTTCGG CCGCGGCCAG CGATATCGCC ACGATCAGCC ACGTCATCCA CGATATCGCC
GAGGCGGCCG GGGCGATCAG CGCCGCCGTC GAGGAACAAG GGGCGGCGAC CAAGGAGATC
TCGCGCAGCG TGCAAGAGGT CTTGTCGACT TCGGAAAGCG TCTCGCACGA TATCCGCACC
CTGGCCGAGG CGGCCCGGGA AACCGAAACC ACCGCCGGCG CCTTGCGCGA CACCGCCGGC
GGGCTTGGTC AGGCGGCGAC CACCTTGCAA GAAAAGGTCG ACGGCTTCCT GGGCGATCTG
CGGCACGGAT AG
|
|---|
| Protein sequence | MFRLHPRGKR QRFVEWIKRR KKTADTPMLR NKRVVVKISV IVAIMGLALC VTVGWLLKSQ
YDALLDERVT QTRVLTEAAV GVATKLQAEV SAGRLTRDQA IETWKTALNG MTYGDNGYLF
AYAVDGINLV LPPRPDLVGK PVVDRGAFLA LQAAATRGPG GGRLDYVWPR VKGGPPIPKV
SWAMEIKAWG ALVGTGIFVD DVQAIFWAKL REAMLIGGLL SAVAIVLVSL ISRDLSAVLG
DIAQRMALIS GGQVDIAVPN QDRRDEAGAM ARSLEVFRGK VAETEHLRGD QERLKASAEA
ARKASLVELA KRFEDSVNSV AQAVAKGART MDENARTMFG LANVTREKAS DSSVMSERTN
ANFQTVASAS EQLSASIREI ANQTDKARVT SQQAVETADQ SADRMAGLVS DAEKIGAVIT
LIEAIASQTN LLALNATIEA ARAGDAGKGF AVVAHEVKNL STQTRKATED IRGQIERVRA
SVSAAASDIA TISHVIHDIA EAAGAISAAV EEQGAATKEI SRSVQEVLST SESVSHDIRT
LAEAARETET TAGALRDTAG GLGQAATTLQ EKVDGFLGDL RHG
|
|---|
| |