More than 300 homologs were found in PanDaTox collection
for query gene Rru_A3665 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A3665  chemotaxis sensory transducer  100 
 
 
567 aa  1098    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  46.32 
 
 
542 aa  417  9.999999999999999e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  44.66 
 
 
562 aa  387  1e-106  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  43.42 
 
 
562 aa  384  1e-105  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  44.48 
 
 
562 aa  385  1e-105  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2091  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
562 aa  381  1e-104  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0245477 
 
 
-
 
NC_007778  RPB_2961  methyl-accepting chemotaxis sensory transducer  44.64 
 
 
563 aa  377  1e-103  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0619  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
561 aa  350  4e-95  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0130228 
 
 
-
 
NC_010505  Mrad2831_3081  methyl-accepting chemotaxis sensory transducer  41.46 
 
 
562 aa  329  1.0000000000000001e-88  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.53055  normal 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  49.46 
 
 
562 aa  295  2e-78  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_007643  Rru_A2076  chemotaxis sensory transducer  47.71 
 
 
561 aa  293  4e-78  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  49.43 
 
 
561 aa  291  2e-77  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  48.76 
 
 
563 aa  283  5.000000000000001e-75  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  47.01 
 
 
565 aa  283  7.000000000000001e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  48.48 
 
 
565 aa  279  1e-73  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  41.13 
 
 
688 aa  278  2e-73  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  46.88 
 
 
608 aa  276  9e-73  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  48.91 
 
 
563 aa  275  2.0000000000000002e-72  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
573 aa  275  2.0000000000000002e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  39.28 
 
 
561 aa  275  2.0000000000000002e-72  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  39.28 
 
 
561 aa  275  2.0000000000000002e-72  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  45.18 
 
 
562 aa  274  3e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  45.72 
 
 
566 aa  274  3e-72  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
566 aa  270  4e-71  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_009485  BBta_7375  methyl-accepting chemotaxis sensory transducer  45.7 
 
 
655 aa  270  5e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  45.55 
 
 
691 aa  270  5.9999999999999995e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  46.4 
 
 
565 aa  270  5.9999999999999995e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  38.45 
 
 
656 aa  269  1e-70  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  43.73 
 
 
689 aa  268  2e-70  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_007643  Rru_A1408  chemotaxis sensory transducer  48.52 
 
 
568 aa  268  2.9999999999999995e-70  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.591131  n/a   
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  46.01 
 
 
656 aa  268  2.9999999999999995e-70  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  44.5 
 
 
688 aa  267  5e-70  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  44.24 
 
 
688 aa  266  5.999999999999999e-70  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  45.99 
 
 
568 aa  265  2e-69  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  44.27 
 
 
691 aa  265  2e-69  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  48.28 
 
 
561 aa  265  2e-69  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  43.01 
 
 
567 aa  265  2e-69  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.74 
 
 
558 aa  264  3e-69  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_010511  M446_0383  methyl-accepting chemotaxis sensory transducer  46.63 
 
 
559 aa  263  4.999999999999999e-69  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.50218 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  45.56 
 
 
561 aa  263  6e-69  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  42.93 
 
 
689 aa  262  1e-68  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  45.66 
 
 
561 aa  261  2e-68  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  49.86 
 
 
561 aa  261  2e-68  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  47.13 
 
 
694 aa  261  2e-68  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  45.33 
 
 
566 aa  261  2e-68  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007643  Rru_A2546  chemotaxis sensory transducer  48.86 
 
 
690 aa  261  3e-68  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  45.94 
 
 
565 aa  261  4e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  44.24 
 
 
567 aa  259  7e-68  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  42.75 
 
 
566 aa  259  1e-67  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  45.4 
 
 
691 aa  258  2e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  44.16 
 
 
688 aa  257  4e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
565 aa  257  5e-67  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  42.73 
 
 
561 aa  256  6e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  43.59 
 
 
558 aa  256  6e-67  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  43.59 
 
 
558 aa  256  7e-67  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  42.93 
 
 
656 aa  256  7e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
681 aa  256  8e-67  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  41.5 
 
 
556 aa  256  1.0000000000000001e-66  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  41.5 
 
 
556 aa  255  1.0000000000000001e-66  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  44.27 
 
 
561 aa  255  1.0000000000000001e-66  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  42.47 
 
 
698 aa  254  2.0000000000000002e-66  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0568  chemotaxis sensory transducer  46.15 
 
 
662 aa  255  2.0000000000000002e-66  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  43.92 
 
 
655 aa  254  2.0000000000000002e-66  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  45.94 
 
 
682 aa  254  3e-66  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  44.42 
 
 
563 aa  254  3e-66  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  40.83 
 
 
568 aa  254  4.0000000000000004e-66  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  46.42 
 
 
566 aa  253  5.000000000000001e-66  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  44.15 
 
 
670 aa  253  7e-66  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
563 aa  253  7e-66  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  44.48 
 
 
686 aa  253  8.000000000000001e-66  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
688 aa  253  9.000000000000001e-66  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  47.01 
 
 
669 aa  252  1e-65  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_007643  Rru_A2554  methyl-accepting chemotaxis sensory transducer  43.55 
 
 
644 aa  252  1e-65  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0186678  n/a   
 
 
-
 
NC_010172  Mext_2555  chemotaxis sensory transducer  47.23 
 
 
561 aa  251  2e-65  Methylobacterium extorquens PA1  Bacteria  normal  0.834906  normal 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  44.95 
 
 
602 aa  251  2e-65  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  39.58 
 
 
676 aa  251  3e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  44.73 
 
 
568 aa  251  3e-65  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  42.3 
 
 
567 aa  250  4e-65  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  44.75 
 
 
563 aa  250  4e-65  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  44.12 
 
 
563 aa  250  6e-65  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
681 aa  248  2e-64  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4788  methyl-accepting chemotaxis sensory transducer  47.28 
 
 
561 aa  248  2e-64  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3581  methyl-accepting chemotaxis sensory transducer  43.27 
 
 
567 aa  248  2e-64  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0981346  normal  0.985512 
 
 
-
 
NC_010725  Mpop_4549  methyl-accepting chemotaxis sensory transducer  48.31 
 
 
561 aa  247  3e-64  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2778  methyl-accepting chemotaxis sensory transducer  47.23 
 
 
558 aa  248  3e-64  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.060825  normal 
 
 
-
 
NC_007958  RPD_1739  chemotaxis sensory transducer  42.59 
 
 
559 aa  247  4e-64  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1977  methyl-accepting chemotaxis sensory transducer  45.33 
 
 
651 aa  247  4.9999999999999997e-64  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.064764  normal 
 
 
-
 
NC_007925  RPC_3476  methyl-accepting chemotaxis sensory transducer  45.04 
 
 
641 aa  246  6e-64  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.640734  normal 
 
 
-
 
NC_007925  RPC_4105  methyl-accepting chemotaxis sensory transducer  44.63 
 
 
561 aa  246  6e-64  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.916882  normal 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
698 aa  246  6.999999999999999e-64  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  48.71 
 
 
556 aa  246  9e-64  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  42.43 
 
 
667 aa  246  9e-64  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
560 aa  246  9.999999999999999e-64  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  44.6 
 
 
586 aa  245  9.999999999999999e-64  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  44.74 
 
 
577 aa  245  9.999999999999999e-64  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  42.38 
 
 
673 aa  245  1.9999999999999999e-63  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_007958  RPD_0840  chemotaxis sensory transducer  42.51 
 
 
712 aa  244  1.9999999999999999e-63  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.174635 
 
 
-
 
NC_011757  Mchl_5373  methyl-accepting chemotaxis sensory transducer  47.09 
 
 
565 aa  244  3e-63  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.620524  normal  0.472724 
 
 
-
 
NC_007778  RPB_4561  methyl-accepting chemotaxis sensory transducer  43.63 
 
 
711 aa  244  3e-63  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  44.09 
 
 
674 aa  244  3.9999999999999997e-63  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
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