| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3478 |
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| Symbol | |
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| ID | 7260496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3711168 |
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| End bp | 3712952 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643563401 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_002459932 |
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| Protein GI | 219669497 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.233037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAA TTAAATACAA AATACTATTA TCTTTTTTAA TTTCTTCAGG TCTTTTAATC
GGGCTGTTCG GCGCTTATAA CATTGTCAGT CTGATAGGCT GGAATCAGCT GGAGGGACAA
TCCATAAAAA AAATGCTGTA TGATGATTAC GATAATGTGA TCAAAAGCGA AGTGGAGACC
GCGGTCCATC TTGTGGATTT TTATTATAAA CAATTCCAAG AGGGTCTGAT GACAGAAGCA
GAAGCCCAGG AAACGGCTAA AAAGGCAGTC AAAGGACTGC GCTATGGGAG CGAAGGATAT
TTTTGGATTG ATGATGTTCA TGGTATTCTC GTTGCCCACC CCATGCTTCC GGATCAGGAA
GGAACGGATC GCCGGGAGCT GACCGATCCT AACGGAGTCA AGTTGATCCA ACAGCTGCTC
AAGGCGGCTC AGGAAAATGA AAACGGCGGG TATTCAGACT ATATGTGGGA AAAACCCAAT
GATGTGGGGA CAAACGAACT CAGCTCGAAA CGAGCCTATT CCAAAGAATT TCAGCCCTGG
AACTGGGTAA TCAGCACGGG GAATTATGTG GACACGATTG ATGCTTTGAT AGAGGAGAAA
AATCAGGAAT TAGGGGACCA TCTCAGGCAA ATCGTCATGG TATCTGTTCT GATTACTGTC
GCTGCCTTGA TTATTCTGGC AGTCATTAGT TTACAAATCA GCCGGAGAAT TTCCGATCCT
CTCAACGCCC TGGTCAAGGC CTTCGAAAAA GATGCCAACG GGCAGATTTA CATACAGGAA
ATCAACCATA CTTCTCAGGA CGAAATCGGC TTGCTGGCGA AAACCCTCAA TGAACTGTCC
GCTCAGTTAA GAAATTTTAT CAGCGGCGCC CAAAACGGTG TACAAGATCT GACGCAACAA
GCCAATGATT TCAATTCTTT GGCAGGGCGG GTAGAAGATA CTGTCCAGGA TTCGGCGGAA
AAGACCGCCA GGATCAATGA ATTGATGGAA GCGGTGGCAG CCTCTACCGG CGAAATCACC
CGGGCTATTG AGGAGATTGA TGCAGCATTG ACCTCCATCT CCCAAAGAGC AGAAGAAGGG
GCTGTTTCTT CCCATGAGGT AAGTGATAGG GCGCAAAAAC TACAGGATGA TTCCAACCAT
TCTATTAAAA AAACTAAGGC AATTTACGAT ACAACCCGTT CCGGTGTGGA ACAGGCCATA
TCCGAAGTGA AAAAAGTAGA GGAAATGATT CACCTTTTAA GTGAGATAAA CGCCATTGCC
GATCAAACGG ACTTATTGGC CTTAAACGCT GCCATTGAAA GCGCCAGAGC CGGAGAAGCC
GGCCGAGGGT TTGCGGTTGT TGCCGATGAG ATAAGAAAAC TGGCGGAAAG TACGGCTTTG
ACCGTGCAAA AAATCGAAGG GATCTCTCGT CAGGTCATTG TTTCCGTGGA TAAACTGGTG
GACAATATCC GGCAGGTTCT GGTGTTTATT GAAGAAGATG TGCTCGCTAA TTATGACAAC
ATGGTAAGTG TAGGGGCGAA GTATGCCAGT GATGCCAAAC ATATCAATGC CATCATGCTG
GAATTAAGTT CTACTTCCGA GGAAATCAGC GCGTCAACCA ATGAAGTATC CACAAGAACA
GGCGAGGTTT CCGGCAGTAT TTCTGCAAGT GCCGAAAGCA TTGAGGGGAT TTTCCAGCAA
ACCGAAATGA TCTTGAACCA TATGAAGGAG ATTAAAAGCA ATTCAGAAAA TAATTTGGCT
ACCGTGACAG ATCTGAAACA GTATATCGAT AAATTTAAAA TTTAG
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| Protein sequence | MKKIKYKILL SFLISSGLLI GLFGAYNIVS LIGWNQLEGQ SIKKMLYDDY DNVIKSEVET
AVHLVDFYYK QFQEGLMTEA EAQETAKKAV KGLRYGSEGY FWIDDVHGIL VAHPMLPDQE
GTDRRELTDP NGVKLIQQLL KAAQENENGG YSDYMWEKPN DVGTNELSSK RAYSKEFQPW
NWVISTGNYV DTIDALIEEK NQELGDHLRQ IVMVSVLITV AALIILAVIS LQISRRISDP
LNALVKAFEK DANGQIYIQE INHTSQDEIG LLAKTLNELS AQLRNFISGA QNGVQDLTQQ
ANDFNSLAGR VEDTVQDSAE KTARINELME AVAASTGEIT RAIEEIDAAL TSISQRAEEG
AVSSHEVSDR AQKLQDDSNH SIKKTKAIYD TTRSGVEQAI SEVKKVEEMI HLLSEINAIA
DQTDLLALNA AIESARAGEA GRGFAVVADE IRKLAESTAL TVQKIEGISR QVIVSVDKLV
DNIRQVLVFI EEDVLANYDN MVSVGAKYAS DAKHINAIML ELSSTSEEIS ASTNEVSTRT
GEVSGSISAS AESIEGIFQQ TEMILNHMKE IKSNSENNLA TVTDLKQYID KFKI
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