More than 300 homologs were found in PanDaTox collection
for query gene Dhaf_3478 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011830  Dhaf_3478  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
594 aa  1201    Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.233037  n/a   
 
 
-
 
NC_011830  Dhaf_0079  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.43 
 
 
588 aa  251  3e-65  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.031352  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  31.27 
 
 
566 aa  236  9e-61  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_011830  Dhaf_0078  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.16 
 
 
588 aa  233  1e-59  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.857462  n/a   
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  30 
 
 
566 aa  228  3e-58  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  32.85 
 
 
556 aa  220  7e-56  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  29.65 
 
 
565 aa  213  4.9999999999999996e-54  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  31.36 
 
 
569 aa  198  3e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  31.55 
 
 
543 aa  195  2e-48  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  29.75 
 
 
548 aa  195  2e-48  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_011898  Ccel_2237  methyl-accepting chemotaxis sensory transducer  33.16 
 
 
676 aa  194  3e-48  Clostridium cellulolyticum H10  Bacteria  normal  0.479493  n/a   
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  31.3 
 
 
548 aa  194  4e-48  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_009616  Tmel_1579  methyl-accepting chemotaxis sensory transducer  29.74 
 
 
565 aa  192  1e-47  Thermosipho melanesiensis BI429  Bacteria  normal  0.327894  n/a   
 
 
-
 
NC_011369  Rleg2_2181  methyl-accepting chemotaxis sensory transducer  29.17 
 
 
606 aa  191  2.9999999999999997e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.440189  normal  0.953277 
 
 
-
 
NC_009483  Gura_3045  methyl-accepting chemotaxis sensory transducer  27.78 
 
 
563 aa  191  2.9999999999999997e-47  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000317109  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  32.1 
 
 
549 aa  191  4e-47  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  29.03 
 
 
548 aa  191  5e-47  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
544 aa  189  9e-47  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  29.51 
 
 
549 aa  189  1e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  28.35 
 
 
549 aa  189  2e-46  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_011898  Ccel_1383  methyl-accepting chemotaxis sensory transducer  32.4 
 
 
571 aa  187  3e-46  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00224736  n/a   
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  32.59 
 
 
548 aa  187  4e-46  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  30.34 
 
 
544 aa  186  1.0000000000000001e-45  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  28.4 
 
 
544 aa  185  2.0000000000000003e-45  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  29.81 
 
 
544 aa  184  3e-45  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  29.12 
 
 
664 aa  184  4.0000000000000006e-45  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  29.96 
 
 
587 aa  184  5.0000000000000004e-45  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  31.55 
 
 
543 aa  182  1e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  28.75 
 
 
563 aa  182  1e-44  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  30.52 
 
 
544 aa  182  1e-44  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  27.7 
 
 
563 aa  182  2e-44  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  27.81 
 
 
513 aa  181  4.999999999999999e-44  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_009485  BBta_6950  putative methyl-accepting chemotaxis receptor/sensory transducer  28.21 
 
 
661 aa  180  5.999999999999999e-44  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  30.2 
 
 
554 aa  179  1e-43  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2464  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.98 
 
 
605 aa  179  1e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  25.63 
 
 
533 aa  179  2e-43  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  30.79 
 
 
554 aa  178  2e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  28.18 
 
 
513 aa  178  3e-43  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  28.33 
 
 
517 aa  177  4e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  28.52 
 
 
567 aa  177  4e-43  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  28.04 
 
 
563 aa  177  6e-43  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  28.33 
 
 
541 aa  177  7e-43  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  28.33 
 
 
541 aa  177  7e-43  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  27.5 
 
 
715 aa  176  8e-43  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2162  putative methyl-accepting chemotaxis sensory transducer  27.08 
 
 
665 aa  176  8e-43  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  29.81 
 
 
585 aa  176  9.999999999999999e-43  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  26.55 
 
 
517 aa  176  9.999999999999999e-43  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  28.31 
 
 
564 aa  175  1.9999999999999998e-42  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3112  chemotaxis sensory transducer  28.77 
 
 
541 aa  175  1.9999999999999998e-42  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2366  methyl-accepting chemotaxis sensory transducer  26.18 
 
 
560 aa  174  2.9999999999999996e-42  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196109  n/a   
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  27.3 
 
 
573 aa  174  2.9999999999999996e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_012034  Athe_1130  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.75 
 
 
571 aa  174  3.9999999999999995e-42  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  26.42 
 
 
517 aa  173  9e-42  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  26.18 
 
 
517 aa  173  9e-42  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  29.61 
 
 
554 aa  172  1e-41  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  27.22 
 
 
513 aa  171  2e-41  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.67 
 
 
546 aa  172  2e-41  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011898  Ccel_0496  methyl-accepting chemotaxis sensory transducer  29.74 
 
 
414 aa  171  2e-41  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  26.37 
 
 
517 aa  171  4e-41  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_007958  RPD_3836  Cache, type 2  28.08 
 
 
661 aa  171  4e-41  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.337162  normal 
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  27 
 
 
517 aa  170  6e-41  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  27 
 
 
517 aa  170  7e-41  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  26.28 
 
 
554 aa  170  8e-41  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  29.29 
 
 
544 aa  169  9e-41  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  32.93 
 
 
557 aa  169  9e-41  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  26.28 
 
 
554 aa  169  1e-40  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  27.93 
 
 
482 aa  169  1e-40  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_011830  Dhaf_0412  methyl-accepting chemotaxis sensory transducer  33.17 
 
 
667 aa  168  2e-40  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000234524  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.28 
 
 
554 aa  169  2e-40  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  27.5 
 
 
464 aa  169  2e-40  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  26.28 
 
 
554 aa  168  2e-40  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  27.5 
 
 
559 aa  167  4e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1253  methyl-accepting chemotaxis sensory transducer  29.07 
 
 
567 aa  167  4e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.010155 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  28.72 
 
 
540 aa  167  5e-40  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  26.28 
 
 
561 aa  167  5.9999999999999996e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  27.22 
 
 
515 aa  167  5.9999999999999996e-40  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  25.84 
 
 
546 aa  167  6.9999999999999995e-40  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  27.97 
 
 
554 aa  167  6.9999999999999995e-40  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.86 
 
 
584 aa  166  8e-40  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_008576  Mmc1_3547  methyl-accepting chemotaxis sensory transducer  26.1 
 
 
676 aa  166  9e-40  Magnetococcus sp. MC-1  Bacteria  normal  0.126617  normal 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  29.69 
 
 
554 aa  166  1.0000000000000001e-39  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0287  methyl-accepting chemotaxis sensory transducer  30.47 
 
 
564 aa  165  3e-39  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  28 
 
 
554 aa  164  3e-39  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  31.73 
 
 
554 aa  164  4.0000000000000004e-39  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  31.73 
 
 
568 aa  164  4.0000000000000004e-39  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3775  methyl-accepting chemotaxis sensory transducer  27.05 
 
 
526 aa  164  4.0000000000000004e-39  Anaeromyxobacter sp. K  Bacteria  normal  0.268134  n/a   
 
 
-
 
NC_011891  A2cp1_3858  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.44 
 
 
526 aa  164  4.0000000000000004e-39  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  27.84 
 
 
554 aa  164  4.0000000000000004e-39  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  28.27 
 
 
558 aa  164  5.0000000000000005e-39  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  30.74 
 
 
554 aa  163  7e-39  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  28.28 
 
 
564 aa  163  8.000000000000001e-39  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_007760  Adeh_3718  methyl-accepting chemotaxis sensory transducer  26.73 
 
 
526 aa  163  9e-39  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.734846  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  26.6 
 
 
554 aa  162  1e-38  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  27.35 
 
 
538 aa  162  1e-38  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  27.49 
 
 
554 aa  162  1e-38  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  32 
 
 
554 aa  162  2e-38  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.36 
 
 
566 aa  162  2e-38  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  29.79 
 
 
569 aa  161  4e-38  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4018  methyl-accepting chemotaxis sensory transducer  28.33 
 
 
713 aa  160  4e-38  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000208845  n/a   
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  25.49 
 
 
540 aa  160  6e-38  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
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