Gene Swol_2162 details

Gene Information

• Locus tag: Swol_2162
• ID: 4283143
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: +
• Start bp: 2496841
• End bp: 2498838
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638139042
• Product: putative methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_754824
• Protein GI: 114567670
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGCA TTGGTTCCAG ATTAACGCTG TATATTAGTA TGGTGGTGCT GTTTTTTTGT 
GCTGGTTTAG GTTTCATATC TTATTTTTAT GCTTCCAAAG CCTTAATGGC TAACATTGAA 
CAAAGTGTGG TAGCCAAAGC CCAGGATGCT ACTAAACTGG TAGGCAGCGA GCTAGATAAC 
CATTTATCGG TAATGGAAAC TATTGCGGAA CAGCCAGAAA TTACTAGTAT GAAATGGGAA 
GAGCAGCGCC CCATTCTGGA GCAAGCCAAC AAAAGACTGG GTTATTTGAT GATGGGGGTT 
GCCGGGCTGG ATGGGCAGGT GCTCACAACT GCGGGTTCGA CCACCAACTT AAAGGATCGG 
GATTACTTTG ACCAGGCCCT GAAGGGCCAA TCCAGTGTTT CCGATCCTAT AGTCAGTAGA 
ATTGATGGTA ACACCATCGT AATGATGGTA AGCCCTATTC GTGGTACCGA GGGGGAAGTT 
ATCGGAGTCC TGGCGGCGGC ACTGGATGGT TTGATCTTGA GCCAAATAAT AGCCGGGGTA 
AATTTTAGTG ATAGCGGTTA TGCCTATATG CTGAACCGTC AAGGCCAGGT TATAGCCCAT 
CCTAAAGAGG AAATGGTAAT AGAACAATAT GATCCGATCG CAGAAGCGGA CAAGGATCCA 
AAACTCGCTC CCCTGGCTGC AATTGTAAAG AATATGTTGA AAGCTGAGTG TGGTTACGGT 
GAATACCTGT GGACTGACGG TACCAACAAA TTCATGGGCT ATGCCCCGGT GGAAAATACC 
GGTTGGTCGA TTGCTGTAAC CGCCCCCCAG GATGAAGTGC TGGCTGGCCT GAAAAGCATG 
ACAGTAGGGG TGCTGGTCGC TGCTCTTGTT TTTCTTCTCA TAGGCATCGC CCTGGCTACT 
TATCTGGGTA GAACCCTGGC CCAACCAATT AAAAATGTTG CCGGAAATGC ATCTCTGATT 
GCTGACGGAG ACTTGAGAGT AGAAATAGCT GCTGGAGCTC TTGCCCGCCA AGACGAGATA 
GGTCATCTGG CCAGTAGCCT GGATAATATG GTTCAAGGCT TGAGAAATAT GCTGCACGAA 
GTAGCCCTTA ACTCCCAGGA AGTAGCAGCC TCCAGTCAAG AGCTGGCCGC TTCGGGTGAA 
AACATAGCCT CAATTGTAGA GGAACTATCC GCTTCCACAG AAGAGATCGC GGCAGGTATA 
ACCAATATAT CTTCTGCAAC TGACGAAGTA AATGCCTCGG GCGAAGGGAT ATCATCTGCT 
TTATTGTTGG CCAGTAAGGA TGCAGAGCAG GGTGTTCTTC AAGCCCAAAG CATTGAAAAG 
AGAGCGGCGC GAATGCAAAA CGGAGCCCAG GATCATAAAA AGACCGCAGA AAATGTTTAT 
GGAACTATAA AAGAAAAACT TACTGCAGCC ATTGAAGAAG CCCGGGTGGT AGAACAAATA 
TCCGAGTTGG CAGAAAATAT ATCCGGTATT GCCAGCCAGA CTAATCTTCT GGCCCTTAAT 
GCCGCTATAG AAGCCGCCCG AGCCGGGGAA CAGGGCAAGG GCTTTGCCGT GGTAGCGGAA 
GAAGTAAGAA AACTGGCAGA AAACTCAGCC TCAGCGGTAG AGGGGATTCA AGGCATGACC 
GAACAGGTGC AAAGGTCTAT CGCTAATTTA ACCAACTATG CTGAAGAATT GCTGAATTTT 
ATTAATACCC AGATTATTGC CGATTATGGA GATATGGTTA CGATATGCAA GCATTACAAG 
AATGATAGCG ACATGTTTTT AAACCTAATC GAAAAAATAA AAAAACATAC CGAAGAAGTC 
CTGGCCTCAG TGGAAGACAT AAACCACAGC CTGGACTCTA CCGCTGGCAC CATAAGAGAC 
TCATCTGCCG GAGCCCAAAA AATAGCAGAG GCCAGCCAAA CAGCTGCTAT AGCAGCCACA 
GAAATAAGTG CCGCATCAGT TAGAATGGCA GAAAACGCCG AAAAGCTGAA CCTGCTTATT 
ACCCGCTTCA AGTTGTAG 

 

Protein sequence

MKSIGSRLTL YISMVVLFFC AGLGFISYFY ASKALMANIE QSVVAKAQDA TKLVGSELDN 
HLSVMETIAE QPEITSMKWE EQRPILEQAN KRLGYLMMGV AGLDGQVLTT AGSTTNLKDR 
DYFDQALKGQ SSVSDPIVSR IDGNTIVMMV SPIRGTEGEV IGVLAAALDG LILSQIIAGV 
NFSDSGYAYM LNRQGQVIAH PKEEMVIEQY DPIAEADKDP KLAPLAAIVK NMLKAECGYG 
EYLWTDGTNK FMGYAPVENT GWSIAVTAPQ DEVLAGLKSM TVGVLVAALV FLLIGIALAT 
YLGRTLAQPI KNVAGNASLI ADGDLRVEIA AGALARQDEI GHLASSLDNM VQGLRNMLHE 
VALNSQEVAA SSQELAASGE NIASIVEELS ASTEEIAAGI TNISSATDEV NASGEGISSA 
LLLASKDAEQ GVLQAQSIEK RAARMQNGAQ DHKKTAENVY GTIKEKLTAA IEEARVVEQI 
SELAENISGI ASQTNLLALN AAIEAARAGE QGKGFAVVAE EVRKLAENSA SAVEGIQGMT 
EQVQRSIANL TNYAEELLNF INTQIIADYG DMVTICKHYK NDSDMFLNLI EKIKKHTEEV 
LASVEDINHS LDSTAGTIRD SSAGAQKIAE ASQTAAIAAT EISAASVRMA ENAEKLNLLI 
TRFKL