Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3478 |
Symbol | |
ID | 7260496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3711168 |
End bp | 3712952 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643563401 |
Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
Protein accession | YP_002459932 |
Protein GI | 219669497 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.233037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAA TTAAATACAA AATACTATTA TCTTTTTTAA TTTCTTCAGG TCTTTTAATC GGGCTGTTCG GCGCTTATAA CATTGTCAGT CTGATAGGCT GGAATCAGCT GGAGGGACAA TCCATAAAAA AAATGCTGTA TGATGATTAC GATAATGTGA TCAAAAGCGA AGTGGAGACC GCGGTCCATC TTGTGGATTT TTATTATAAA CAATTCCAAG AGGGTCTGAT GACAGAAGCA GAAGCCCAGG AAACGGCTAA AAAGGCAGTC AAAGGACTGC GCTATGGGAG CGAAGGATAT TTTTGGATTG ATGATGTTCA TGGTATTCTC GTTGCCCACC CCATGCTTCC GGATCAGGAA GGAACGGATC GCCGGGAGCT GACCGATCCT AACGGAGTCA AGTTGATCCA ACAGCTGCTC AAGGCGGCTC AGGAAAATGA AAACGGCGGG TATTCAGACT ATATGTGGGA AAAACCCAAT GATGTGGGGA CAAACGAACT CAGCTCGAAA CGAGCCTATT CCAAAGAATT TCAGCCCTGG AACTGGGTAA TCAGCACGGG GAATTATGTG GACACGATTG ATGCTTTGAT AGAGGAGAAA AATCAGGAAT TAGGGGACCA TCTCAGGCAA ATCGTCATGG TATCTGTTCT GATTACTGTC GCTGCCTTGA TTATTCTGGC AGTCATTAGT TTACAAATCA GCCGGAGAAT TTCCGATCCT CTCAACGCCC TGGTCAAGGC CTTCGAAAAA GATGCCAACG GGCAGATTTA CATACAGGAA ATCAACCATA CTTCTCAGGA CGAAATCGGC TTGCTGGCGA AAACCCTCAA TGAACTGTCC GCTCAGTTAA GAAATTTTAT CAGCGGCGCC CAAAACGGTG TACAAGATCT GACGCAACAA GCCAATGATT TCAATTCTTT GGCAGGGCGG GTAGAAGATA CTGTCCAGGA TTCGGCGGAA AAGACCGCCA GGATCAATGA ATTGATGGAA GCGGTGGCAG CCTCTACCGG CGAAATCACC CGGGCTATTG AGGAGATTGA TGCAGCATTG ACCTCCATCT CCCAAAGAGC AGAAGAAGGG GCTGTTTCTT CCCATGAGGT AAGTGATAGG GCGCAAAAAC TACAGGATGA TTCCAACCAT TCTATTAAAA AAACTAAGGC AATTTACGAT ACAACCCGTT CCGGTGTGGA ACAGGCCATA TCCGAAGTGA AAAAAGTAGA GGAAATGATT CACCTTTTAA GTGAGATAAA CGCCATTGCC GATCAAACGG ACTTATTGGC CTTAAACGCT GCCATTGAAA GCGCCAGAGC CGGAGAAGCC GGCCGAGGGT TTGCGGTTGT TGCCGATGAG ATAAGAAAAC TGGCGGAAAG TACGGCTTTG ACCGTGCAAA AAATCGAAGG GATCTCTCGT CAGGTCATTG TTTCCGTGGA TAAACTGGTG GACAATATCC GGCAGGTTCT GGTGTTTATT GAAGAAGATG TGCTCGCTAA TTATGACAAC ATGGTAAGTG TAGGGGCGAA GTATGCCAGT GATGCCAAAC ATATCAATGC CATCATGCTG GAATTAAGTT CTACTTCCGA GGAAATCAGC GCGTCAACCA ATGAAGTATC CACAAGAACA GGCGAGGTTT CCGGCAGTAT TTCTGCAAGT GCCGAAAGCA TTGAGGGGAT TTTCCAGCAA ACCGAAATGA TCTTGAACCA TATGAAGGAG ATTAAAAGCA ATTCAGAAAA TAATTTGGCT ACCGTGACAG ATCTGAAACA GTATATCGAT AAATTTAAAA TTTAG
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Protein sequence | MKKIKYKILL SFLISSGLLI GLFGAYNIVS LIGWNQLEGQ SIKKMLYDDY DNVIKSEVET AVHLVDFYYK QFQEGLMTEA EAQETAKKAV KGLRYGSEGY FWIDDVHGIL VAHPMLPDQE GTDRRELTDP NGVKLIQQLL KAAQENENGG YSDYMWEKPN DVGTNELSSK RAYSKEFQPW NWVISTGNYV DTIDALIEEK NQELGDHLRQ IVMVSVLITV AALIILAVIS LQISRRISDP LNALVKAFEK DANGQIYIQE INHTSQDEIG LLAKTLNELS AQLRNFISGA QNGVQDLTQQ ANDFNSLAGR VEDTVQDSAE KTARINELME AVAASTGEIT RAIEEIDAAL TSISQRAEEG AVSSHEVSDR AQKLQDDSNH SIKKTKAIYD TTRSGVEQAI SEVKKVEEMI HLLSEINAIA DQTDLLALNA AIESARAGEA GRGFAVVADE IRKLAESTAL TVQKIEGISR QVIVSVDKLV DNIRQVLVFI EEDVLANYDN MVSVGAKYAS DAKHINAIML ELSSTSEEIS ASTNEVSTRT GEVSGSISAS AESIEGIFQQ TEMILNHMKE IKSNSENNLA TVTDLKQYID KFKI
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