| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3836 |
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| Symbol | |
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| ID | 4024352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4273282 |
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| End bp | 4275267 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964040 |
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| Product | Cache, type 2 |
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| Protein accession | YP_570958 |
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| Protein GI | 91978299 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.337162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGC CCCGGCTTTC GCTCGGTTTT CAGATCTACT CGATTATTGC ACTCAGCTTC
TGCGGCCTGA TCGGCCTCGC GATCATGCAG GCTAATACTC TTGACGACGC GCTGCGGGAG
CAACGCCACA ATGAGTTGGT GCACATGACT GAGCTCGCCC TCGGCATCGC CCGCGACGAG
CACGACGCCG CCACCCGCGG CCTGGTCACC CACCAGCAGG CACAAATCAC CGCGGCGGAA
CGGATCGCCA AGATGCGCTA CGGCAATGGC GACTATTTCT GGATCAATGA TCTCGGTCCG
AAGATGGTGA TGCATCCGGT CAAGCCTGAG CTGAACGGCA AAGACCTGTC CGACGAAAAG
GATCCGACCG GCAAGCGCCT GTTCGTGGCG TTCGTCGATA CCGTGAAAGC GAGCGGCGCC
GGCTTCGTCG ACTATCGATG GCCGAAGCCC GGCGCCGACA GGCCGCAGCC GAAGATCTCC
TATGTCGCCG GTTTTCAACC CTGGAACTGG GTGATCGGCA CCGGCGTCTA TGTTGATGAT
CTCGAGGCGC AGGTCTGGAG CAGCATTGAG CGGGTCATGG TCGCAGCCGG ACTGATCGTC
GTGTTGCTCG GCGCAGTGAC GCTGTTCATC GCGCGCCGGA TGTCGTCAGC GCTCGGCGGG
ATGTCGGCCG CGGTGACGCG GTTGGGCGAC GGCGATTTCG AGATCAGGCT GCCGGGGCTC
GATCGCTCCG ACGAACTCGG CGACATGGCG CGCGCGATCG AGGCATTCAA GGTCAAGGCG
ATCGAAAAGG CCCGCGCCGA CACCGCGCGC GACGCGGAGC TCCGCCGCAT CGCCGAAGAC
GCCAAGCGGC AGGCGCTGCG CGACATGGCC GATACGGTCG AGCGCGAGAC CGCGATTGCT
GTCGACCAGG TCGCCAGCCG CACCGACCTG ATGGCGCGTG GCGCAGTGCT GATGACCACC
GGCGCGGAAA TGCTCGGCCA GCAGAGCAGT GGCGTCGCCG CAGCCGCCGA GCAGGCGCTG
GCGACATCGC AGATGGTCGC CGCCAGTTCG TCCGAGCTGA GCGCGTCGAT CAACGAGATT
GCCGCCAAGG TCACGTCGTC GCGCAATCTG ACGCTCCGGG CCGTCAATGC GTCCAGCCAG
GCCGAGACGA TGATCGCCAA GCTGTCCGCA GCGGCGACGC GGGTCGGCGC GGTTACCAAT
CTGATCAGCG AGATCGCCGG TCAGACCAAT CTTCTGGCGC TCAACGCCAC CATCGAGGCG
GCTCGCGCCG GCGACGCCGG CCGCGGTTTC GCCGTGGTCG CTGCGGAAGT GAAGTCGCTG
GCTGAGCAGA CCGCCAAGGC CACAGGCGAG ATCTCGCAAC AGATCGACGA GATCCAGCAG
GCCACATCCG ACTCGGTCGA ATCGATCAAC GCGATCGGCG ATGCGATCCG CAACGTCGAC
CAGGTATCGG CGGTGATCGC GACCTCGATC GATCAGCAGA GCACGGTCAC GCGCGAGATC
GCTCGCGCCG TCGCCGAGAC CTCACAGGCG GCGCGCAACG TCGCGGCGCA GATCGTCACG
GTCTCGAGCG AAGCGGTGAA AACGGGACGG CGCGCTGTCG AGATTCAGGA CGGTTCGGTC
GAAATCGCCA GCCGGATTGA CAATCTGCGC GGCGTTCTCA CCCGCGTGAT CCGCACCTCG
ACCGCCGACG TCGATCGCCG CGCGCACGCC CGGATCGACA TCGAGCGCCC CGGAACGATC
GAGGCCGGAG GCAGAACTTA CGCCGTGCAA GTGCGGGATA TTTCCGAAGC CGGCGCGCGG
CTCGCCGACG CGATCGAAGC GCTTGGCCCG GATTGCGCCG TCACACTCGG CATCGACGGC
TTGCCCGGCA AGCTGCACGG TGTGATCGTC GCCAGCGACC CCGATCGGAC GTTGGTGAAG
TTCGACCTGT CGGAGCCGCA GCAACAGATC ATCCGCAGCT TCGTCGCCCA TCGCCGCGCC
GCGTAG
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| Protein sequence | MKLPRLSLGF QIYSIIALSF CGLIGLAIMQ ANTLDDALRE QRHNELVHMT ELALGIARDE
HDAATRGLVT HQQAQITAAE RIAKMRYGNG DYFWINDLGP KMVMHPVKPE LNGKDLSDEK
DPTGKRLFVA FVDTVKASGA GFVDYRWPKP GADRPQPKIS YVAGFQPWNW VIGTGVYVDD
LEAQVWSSIE RVMVAAGLIV VLLGAVTLFI ARRMSSALGG MSAAVTRLGD GDFEIRLPGL
DRSDELGDMA RAIEAFKVKA IEKARADTAR DAELRRIAED AKRQALRDMA DTVERETAIA
VDQVASRTDL MARGAVLMTT GAEMLGQQSS GVAAAAEQAL ATSQMVAASS SELSASINEI
AAKVTSSRNL TLRAVNASSQ AETMIAKLSA AATRVGAVTN LISEIAGQTN LLALNATIEA
ARAGDAGRGF AVVAAEVKSL AEQTAKATGE ISQQIDEIQQ ATSDSVESIN AIGDAIRNVD
QVSAVIATSI DQQSTVTREI ARAVAETSQA ARNVAAQIVT VSSEAVKTGR RAVEIQDGSV
EIASRIDNLR GVLTRVIRTS TADVDRRAHA RIDIERPGTI EAGGRTYAVQ VRDISEAGAR
LADAIEALGP DCAVTLGIDG LPGKLHGVIV ASDPDRTLVK FDLSEPQQQI IRSFVAHRRA
A
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