| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3547 |
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| Symbol | |
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| ID | 4482502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4450218 |
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| End bp | 4452248 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639724296 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_867438 |
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| Protein GI | 117926821 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.126617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAAC TTTCCGAGAC TTCTTTGCGC GCTCGTGTAG GTATGATTAT CGGTGTAGCC
AGTCTGTTCA TGGTACTGAT AGGGGTGATT TTAATAGCCT CCAAAAAGGA GCGCATGTTA
GAAGATCGGT ATAGCTTTGT GCGCATGCAG GTTGAGTCAG CCTACACCAT TTTGGCACAT
TTTAATGCCT TGGAGCAGCA GGGCCGTTTG AGCACCCAAC AGGCGCAAGA ACAGGCCAAA
AATATGATTA AGGTGTTGCG ATATGATGGG AGTAACTATT TTTGGATAAA TGACAGTCAT
CCCACCATGA TTATGCATCC ACTTAAACCG GCGTTGGATG GCAAAGACCT GACAGAGGTA
ACCGATCAAG CGGGTAAACG GCTGTTTGTG GCGATGGTCA CCGCGCTGCA ACAGGCTGAC
GATGCTCTGG TGGAGTACCA TTGGACCAAG CCCAACGCCA CGGAACCCTC GCCTAAAGTC
TCTAGCGTAA AAAAATTTCA GCCGTGGGGG TGGATCATCG GTTCGGGCAT CTATATTGAT
GATGTGGATG AAATTTTTAA GGGTGATGCT CGAACGGCCG CAATTTATCT GATGGGATTT
GTGGCATTGA CTCTAGTCTT TGGTTTGCTG GTAGGGCGCT CTATTTTAAA CGCCTTGGGG
TGTGAACCCA AGGATCTGGC GCACATGGCC GGTCGGGTAG CCCGAGGTAA TTTGGTCATA
GGTGATAAAA CGCTAGATAA GGCTCGTAAG AGCCATGCCG ACAGCATTGT TAATGCCATG
TTACAGATGA CCCAATCCCT CCAGCAGTTG GTGCAGGAGA TTACCCAGCA GTCACAGCAT
ATGGGGCAAG CGTCGCAAAA ATTGTTAAAA ATGTCCAACC TGCTCACCCG TGGAGCCGGG
GATATGCGAA GCCACGCCAA CCAAGCGTGT GATACCTCTA AAGAGGTTAG TCAAAAAATG
ACCGAGGTAT CGGCCGCCGT GGGTAACAGC ACTGAAAACC TGTATACGAT CTCCCATACC
ATTGCCAATA TGAGCAGTGA CATGAGTGCG ATTTCTGCGG CCAGTGAACA GGCGGATGCA
GGTTTGTCCG GCGTAGCCAC AGCCGTAAAG CTGGTAGATG GCTCGCTAGA GCACCTTTAC
GAAGGGGCCA ACCAGAACCG CGATGCCGTA CATACGGTGC GTGAGGCGGT AACCGAGTTG
GCGTTGGCTG TGCGGGAGAT GCGTCAACGC TGCACCAGTG CCAGCCAAGG TTCTGAACAG
GCGCAGCAGC AGGTGCAGAC CACCAATCGG TTGGCTGGTG AGTTGGAAAA ATCCGCCCTT
GAGATTGGTA AGGTGGTGGG CTTGATCAAT GATATTGCGG AGCAGACCAA TATGTTGGCC
CTGAATGCAT CCATTGAAGC CGCCGGTGCT GGGGAGTCGG GTAAAGGCTT TGCCGTGGTC
GCCAACGAGG TTAAAGAGCT GGCGCGGCAG ACGGCAGAGG CGACCTTCAA TATTGGCCAC
CAAGTGGATA ATATTCAAGA TAGCAGTGGT CAGGTAGCCC GTAGTAGTGC GGAGATGACC
AAGGTAATTC AACGTATTCA TGAAGAGAAT GCCAGCATCA ATCAGGTGGC GGATGAGCAG
GAGAGCATTC TAACCCGCGT CTCAGAAACC ATGGACTTAA CCGCAACCAA TACCGATGGC
CTATCGAAAC AAATGGGTAC TTTGACGGGA CAGATGGGCG AGGCATCGCG ATCCTTAGGG
GAGATTGCAC AGGGTATTGG TGAGGTTGCG GCCCGGGTTT CTGAAAGCAG TAGCGGGGTA
GGTATGATCA ATCATCAGGT TGAGGAGGCC TCCCTTACCC AAGGGCAAAT TAGCGATTTT
GTGACCGAAG CAGCAGAAAC AACCCGTCGG GTTGCCCTTA CCATGGACAA TATTGGTCAT
GTAACCAGTG AGTTTGAAGG TATCTCCCAG GAGGTAAGCG ACTACGCCGA ACAGCTGGCC
CAAACCAGTG GCAAGTTAAA TGAAATGGTG CGTCGTTTTA CCGTGGCCTA A
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| Protein sequence | MLQLSETSLR ARVGMIIGVA SLFMVLIGVI LIASKKERML EDRYSFVRMQ VESAYTILAH
FNALEQQGRL STQQAQEQAK NMIKVLRYDG SNYFWINDSH PTMIMHPLKP ALDGKDLTEV
TDQAGKRLFV AMVTALQQAD DALVEYHWTK PNATEPSPKV SSVKKFQPWG WIIGSGIYID
DVDEIFKGDA RTAAIYLMGF VALTLVFGLL VGRSILNALG CEPKDLAHMA GRVARGNLVI
GDKTLDKARK SHADSIVNAM LQMTQSLQQL VQEITQQSQH MGQASQKLLK MSNLLTRGAG
DMRSHANQAC DTSKEVSQKM TEVSAAVGNS TENLYTISHT IANMSSDMSA ISAASEQADA
GLSGVATAVK LVDGSLEHLY EGANQNRDAV HTVREAVTEL ALAVREMRQR CTSASQGSEQ
AQQQVQTTNR LAGELEKSAL EIGKVVGLIN DIAEQTNMLA LNASIEAAGA GESGKGFAVV
ANEVKELARQ TAEATFNIGH QVDNIQDSSG QVARSSAEMT KVIQRIHEEN ASINQVADEQ
ESILTRVSET MDLTATNTDG LSKQMGTLTG QMGEASRSLG EIAQGIGEVA ARVSESSSGV
GMINHQVEEA SLTQGQISDF VTEAAETTRR VALTMDNIGH VTSEFEGISQ EVSDYAEQLA
QTSGKLNEMV RRFTVA
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