Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0009 |
Symbol | |
ID | 5171563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 8023 |
End bp | 10008 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640562507 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001243614 |
Protein GI | 148269154 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTTC GTGCGAAGGT TTTCCTTGTT ATACTGGTTG TTCTGGCAGG ACTCCTTGTT AGTTTTTACC TCATCTATCA GAGCGTTTCT GGTGCGGTTG TTGAAACAGT CAAGAAAAAT GCTACTGTTC AGATTCAGGT TCTTTCGAAT TATTTTGCTG AAAAGTTGAA CAAATACGTA GAAAGGGCAG TTGCTCTGAC CCAGTCCATG GAAGCACAGC TTCTCGATAC ATATTCCATG GCTTCCAACA TGGTCAAGCT GGTGAAAGAA GCTTCCAATA CACTCATTGC TGGAATTACG ATAGAAGAAA TGACGGGTTC TGGCTACATT GCTAAAGCTG ACGGATTAGA GCAGATCGAT TCTTCTTCGA CCATCTATCA AAAATATATG GATCTTGTTA AGAATTCGCA AAATCCATAT TTAGTTACCT CGGATGTCTT TGAAGGTAAA CCCGCCCTCG TTGTTTTAGC TCCGCTAGGT GCGTTCGGTG CGGGCACGCT CGGCGCAGTA GGTTATGTGA TAGATCTTTC TCAAAACAAG GATTTCTGGC ACACGGTGGC AGAAGGAGGA AAACTGGGAG AGAGCGGCTA CGGGCTTCTT GTCACAAGCG ACGGGAAAGT ACTGATTCAC AAAGACATGG GAAACTTCAT GAAAGACGTG AAGGAGCTTG GAGACTTTGA GAGAGCATTC GAGGAAGCAA AGAAAGGTGG AGAGAAATAC GTAGAGTACG AATACAACGG AGAGAAGAAA TACACCGTGT GGGAAAAAGT GCCCGGATAC GACTTCTACA TCTTCTCGAC GGGGTACCTG GATGAACTTC TTGCAGAAGG AAGGAAAGCG ACCTTTGGGA CGATAGTGAC GTATGTAGTG TTTGGCGGCG TGATCTTTGC GGTGTTGTTT GTTTCGATGA TGCCGATAGT GAAGAGGATG AGAGAGCAGG TGGAGAGAGT GAAGAGATTC GGAGAAGGGG ACCTGACAGT AGAGTTCGAA GCGAAAGGGA AAGATGAACT GACCCAGATA GAAGAGAGCC TGAAAGAAGC GGTACTATCA CTCAAAGAGA TGATAGTGAG CATCATAGAA GCTTCGAAAG AGCTTAGCGG AGCATCAGAA GAGATAAAAG TTCTCTCAGA AGAGAGCCAC AAGATGTCAG AGAACCTGCA CGAAGAAGCC AAGAAGATAC TGGACGAGGC GAACAACATG AGCAGTGCGC TGACAGAAGT GACGAGTGGA GTAGAAGAAG TGGCAGCGAG TGCGCAGAAC ATCTCAAAGA TCACCCAGGA TCTGACAGAA AGGTCAGAAG CGGTGACGAA AGCGGCAAGA GAAGGAACAG AGAGAGTAGA AGCGGTGGGA GGAGTCATAA ACAAACTCAA AGGGTCAGCA GAAAGACAGA GGGACTACCT GAGAGAACTC GTTGACTCAG CCAAGACGAT AGGGGAGATA GTGGACACGA TCAGCTCGAT AGCAGAGCAG ACGAACCTGC TCGCGTTGAA CGCAGCGATA GAAGCAGCTC GAGCTGGGGA AGCGGGAAGG GGCTTTGCGG TTGTGGCAGA CGAGATAAGG AAACTTGCAG AAGAGAGCCA GAGGGCGACA GAAGACATAG CGAAGATGCT GAGCAATCTG AGGACGACGA TAGAACACGT AGAGAACGGC TCGAAAGAGA TGTTCGAAGG AGTGGACGAG ATAGCGGTGA TGGGAGAAGA AGTGACGAAG AGATTCAGAG AGATCCTTGG AAGGATAGAA GAGATCAACA GCATGATAGA GAACACAGCT GCCACTGCGC AGGAGCAGGG AGCGGCCGCA GAAGAGATGG CAAGTGCCAT GGACAACGTC ACAAAGATCG TTGAAGGGGT TGTGGAAAGC CTGAACAGGA TGGAGTCTCT CATAGAAAAC CAGACCGAGT CTGCTGCCAG AGTCTCAGAG GCTGCCGAAA AACTCTCTTC CCTCTCTGAA CAGCTCTCAA CGCTCGTTCA AAAGTTCAAG GTGTGA
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Protein sequence | MTLRAKVFLV ILVVLAGLLV SFYLIYQSVS GAVVETVKKN ATVQIQVLSN YFAEKLNKYV ERAVALTQSM EAQLLDTYSM ASNMVKLVKE ASNTLIAGIT IEEMTGSGYI AKADGLEQID SSSTIYQKYM DLVKNSQNPY LVTSDVFEGK PALVVLAPLG AFGAGTLGAV GYVIDLSQNK DFWHTVAEGG KLGESGYGLL VTSDGKVLIH KDMGNFMKDV KELGDFERAF EEAKKGGEKY VEYEYNGEKK YTVWEKVPGY DFYIFSTGYL DELLAEGRKA TFGTIVTYVV FGGVIFAVLF VSMMPIVKRM REQVERVKRF GEGDLTVEFE AKGKDELTQI EESLKEAVLS LKEMIVSIIE ASKELSGASE EIKVLSEESH KMSENLHEEA KKILDEANNM SSALTEVTSG VEEVAASAQN ISKITQDLTE RSEAVTKAAR EGTERVEAVG GVINKLKGSA ERQRDYLREL VDSAKTIGEI VDTISSIAEQ TNLLALNAAI EAARAGEAGR GFAVVADEIR KLAEESQRAT EDIAKMLSNL RTTIEHVENG SKEMFEGVDE IAVMGEEVTK RFREILGRIE EINSMIENTA ATAQEQGAAA EEMASAMDNV TKIVEGVVES LNRMESLIEN QTESAARVSE AAEKLSSLSE QLSTLVQKFK V
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