More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_2475 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2475  methyl-accepting chemotaxis protein  100 
 
 
598 aa  1228    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0390427  n/a   
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  94.98 
 
 
598 aa  1140    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
NC_007298  Daro_3097  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
602 aa  436  1e-121  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1958  methyl-accepting chemotaxis sensory transducer  38.93 
 
 
598 aa  415  1e-114  Thauera sp. MZ1T  Bacteria  normal  0.57626  n/a   
 
 
-
 
NC_013173  Dbac_0041  methyl-accepting chemotaxis sensory transducer  36.72 
 
 
573 aa  341  2e-92  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0561  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
505 aa  324  2e-87  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  33.46 
 
 
715 aa  310  5.9999999999999995e-83  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  32.95 
 
 
696 aa  271  2.9999999999999997e-71  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  32.82 
 
 
696 aa  262  1e-68  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4401  methyl-accepting chemotaxis sensory transducer  33.02 
 
 
695 aa  260  5.0000000000000005e-68  Geobacter uraniireducens Rf4  Bacteria  normal  0.896591  n/a   
 
 
-
 
NC_012918  GM21_0484  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
693 aa  256  8e-67  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000150879 
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
693 aa  254  3e-66  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  31.2 
 
 
698 aa  238  2e-61  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  34.27 
 
 
524 aa  222  1.9999999999999999e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0932  methyl-accepting chemotaxis sensory transducer  30.06 
 
 
707 aa  209  1e-52  Geobacter lovleyi SZ  Bacteria  normal  0.1893  n/a   
 
 
-
 
NC_007953  Bxe_C0009  methyl-accepting chemotaxis sensory transducer  30.09 
 
 
511 aa  207  5e-52  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3399  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
526 aa  204  4e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  28.1 
 
 
546 aa  203  6e-51  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  33.19 
 
 
514 aa  203  6e-51  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  33.58 
 
 
522 aa  196  1e-48  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
522 aa  195  2e-48  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  35.54 
 
 
534 aa  195  2e-48  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
522 aa  195  2e-48  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
522 aa  194  6e-48  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  34.96 
 
 
523 aa  193  1e-47  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4857  methyl-accepting chemotaxis protein  33.1 
 
 
535 aa  190  8e-47  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_55750  putative chemotaxis transducer  34.66 
 
 
538 aa  187  3e-46  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  34.56 
 
 
523 aa  187  7e-46  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  34.3 
 
 
523 aa  186  1.0000000000000001e-45  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  35.52 
 
 
533 aa  185  2.0000000000000003e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  36.16 
 
 
534 aa  183  6e-45  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  34.73 
 
 
527 aa  182  1e-44  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  34.04 
 
 
527 aa  183  1e-44  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  34.97 
 
 
534 aa  180  4.999999999999999e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
522 aa  180  8e-44  Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  31.95 
 
 
525 aa  171  3e-41  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  29.08 
 
 
487 aa  168  2e-40  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
495 aa  167  4e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  34.16 
 
 
528 aa  167  6.9999999999999995e-40  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  31.08 
 
 
482 aa  164  5.0000000000000005e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  29.82 
 
 
470 aa  162  2e-38  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  30.21 
 
 
484 aa  160  5e-38  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  31.23 
 
 
470 aa  159  1e-37  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  33.61 
 
 
549 aa  158  2e-37  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  32.43 
 
 
547 aa  156  1e-36  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  29.88 
 
 
470 aa  155  2e-36  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  28.48 
 
 
475 aa  155  2.9999999999999998e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  28.18 
 
 
468 aa  154  2.9999999999999998e-36  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  27.97 
 
 
511 aa  154  4e-36  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  35.38 
 
 
569 aa  153  1e-35  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  32.61 
 
 
648 aa  150  7e-35  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  31.73 
 
 
637 aa  149  2.0000000000000003e-34  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  31.96 
 
 
714 aa  148  3e-34  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
714 aa  147  4.0000000000000006e-34  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  31.37 
 
 
713 aa  147  5e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  29 
 
 
558 aa  147  7.0000000000000006e-34  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  30.84 
 
 
481 aa  147  7.0000000000000006e-34  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  32.78 
 
 
647 aa  146  1e-33  Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  29.41 
 
 
638 aa  144  3e-33  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  32.6 
 
 
558 aa  145  3e-33  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  30.25 
 
 
639 aa  144  4e-33  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  32.5 
 
 
647 aa  144  6e-33  Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
714 aa  143  8e-33  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0629  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.43 
 
 
647 aa  143  9e-33  Pseudomonas putida GB-1  Bacteria  normal  0.624074  hitchhiker  0.000681907 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  31.19 
 
 
559 aa  142  9.999999999999999e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  33.61 
 
 
543 aa  143  9.999999999999999e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0931  methyl-accepting chemotaxis protein  29.43 
 
 
543 aa  142  9.999999999999999e-33  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  29.51 
 
 
622 aa  142  1.9999999999999998e-32  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  32.22 
 
 
648 aa  142  1.9999999999999998e-32  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  30.98 
 
 
549 aa  142  1.9999999999999998e-32  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  31.29 
 
 
638 aa  141  3e-32  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  32.24 
 
 
549 aa  141  3.9999999999999997e-32  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  33.05 
 
 
533 aa  141  3.9999999999999997e-32  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  29.41 
 
 
448 aa  140  7e-32  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.92 
 
 
646 aa  140  7e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
541 aa  140  8.999999999999999e-32  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  32.57 
 
 
568 aa  140  8.999999999999999e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  32.87 
 
 
539 aa  139  1e-31  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  31.09 
 
 
570 aa  139  1e-31  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  31.77 
 
 
630 aa  139  1e-31  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_012918  GM21_3345  methyl-accepting chemotaxis sensory transducer  31.47 
 
 
542 aa  139  1e-31  Geobacter sp. M21  Bacteria  n/a    normal  0.0226154 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  30.77 
 
 
688 aa  138  2e-31  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
545 aa  139  2e-31  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  31.77 
 
 
630 aa  139  2e-31  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
636 aa  139  2e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  29.89 
 
 
638 aa  139  2e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  30.38 
 
 
554 aa  138  3.0000000000000003e-31  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  31.2 
 
 
646 aa  137  4e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  27.88 
 
 
468 aa  138  4e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  31.77 
 
 
630 aa  138  4e-31  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  27.88 
 
 
468 aa  137  4e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  30.79 
 
 
714 aa  137  5e-31  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  31.77 
 
 
630 aa  137  5e-31  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  29.87 
 
 
688 aa  137  5e-31  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  27.88 
 
 
476 aa  137  5e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  28.69 
 
 
638 aa  137  6.0000000000000005e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  30.3 
 
 
632 aa  137  6.0000000000000005e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
554 aa  137  6.0000000000000005e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
630 aa  137  7.000000000000001e-31  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  31.3 
 
 
714 aa  137  7.000000000000001e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
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