More than 300 homologs were found in PanDaTox collection
for query gene Sama_3598 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_3598  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
412 aa  826    Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0160  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
653 aa  139  7.999999999999999e-32  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  31.28 
 
 
568 aa  139  1e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3785  methyl-accepting chemotaxis sensory transducer  35.13 
 
 
653 aa  137  4e-31  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3858  methyl-accepting chemotaxis sensory transducer  35.13 
 
 
653 aa  136  8e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  30.93 
 
 
714 aa  136  8e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3985  methyl-accepting chemotaxis sensory transducer  34.81 
 
 
653 aa  134  3e-30  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  31.73 
 
 
554 aa  134  3e-30  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  30.56 
 
 
638 aa  134  3.9999999999999996e-30  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  35.02 
 
 
548 aa  134  3.9999999999999996e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  32.12 
 
 
739 aa  133  3.9999999999999996e-30  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  31.45 
 
 
637 aa  133  6e-30  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  31.84 
 
 
647 aa  133  6.999999999999999e-30  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  30.38 
 
 
714 aa  132  1.0000000000000001e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_010506  Swoo_4441  methyl-accepting chemotaxis sensory transducer  31.32 
 
 
654 aa  132  1.0000000000000001e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  30.58 
 
 
543 aa  131  2.0000000000000002e-29  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
640 aa  130  4.0000000000000003e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  30.39 
 
 
630 aa  129  7.000000000000001e-29  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_009439  Pmen_1353  methyl-accepting chemotaxis sensory transducer  42.35 
 
 
547 aa  129  8.000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.769572  normal 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  30.39 
 
 
630 aa  129  9.000000000000001e-29  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.65 
 
 
523 aa  129  1.0000000000000001e-28  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  31.51 
 
 
554 aa  129  1.0000000000000001e-28  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  27.4 
 
 
640 aa  128  1.0000000000000001e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  31.52 
 
 
714 aa  129  1.0000000000000001e-28  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  30.12 
 
 
558 aa  127  2.0000000000000002e-28  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  32.02 
 
 
673 aa  128  2.0000000000000002e-28  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  32.03 
 
 
638 aa  128  2.0000000000000002e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3809  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
547 aa  128  2.0000000000000002e-28  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  30.39 
 
 
630 aa  128  2.0000000000000002e-28  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  29.04 
 
 
640 aa  127  3e-28  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  32.63 
 
 
738 aa  127  3e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  29.5 
 
 
636 aa  127  4.0000000000000003e-28  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  30.98 
 
 
712 aa  127  4.0000000000000003e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  37.41 
 
 
548 aa  127  4.0000000000000003e-28  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_009654  Mmwyl1_0922  methyl-accepting chemotaxis sensory transducer  34.98 
 
 
674 aa  127  5e-28  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  31.2 
 
 
647 aa  126  6e-28  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
564 aa  126  6e-28  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  29.49 
 
 
641 aa  126  7e-28  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  28.93 
 
 
541 aa  126  7e-28  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
541 aa  126  9e-28  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
634 aa  125  9e-28  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1210  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
540 aa  125  1e-27  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.289047 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  30.5 
 
 
560 aa  125  1e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  30.5 
 
 
674 aa  125  1e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  29.83 
 
 
630 aa  125  1e-27  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  30.6 
 
 
639 aa  125  1e-27  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  30.66 
 
 
636 aa  125  1e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  30.17 
 
 
548 aa  124  2e-27  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  31.49 
 
 
628 aa  125  2e-27  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  30.48 
 
 
545 aa  125  2e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_008463  PA14_64920  putative methyl-accepting chemotaxis protein  30.77 
 
 
541 aa  124  2e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
541 aa  124  3e-27  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  30.16 
 
 
541 aa  124  3e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  31.59 
 
 
652 aa  124  3e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_004578  PSPTO_3685  methyl-accepting chemotaxis protein  31.15 
 
 
546 aa  124  4e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05136  torS; sensor protein TorS  38.6 
 
 
558 aa  123  5e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001261  methyl-accepting chemotaxis protein  33.33 
 
 
547 aa  123  5e-27  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  32.34 
 
 
679 aa  123  6e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1624  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
626 aa  123  6e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  0.835429  n/a   
 
 
-
 
NC_007912  Sde_0343  methyl-accepting chemotaxis sensory transducer  32.59 
 
 
547 aa  123  7e-27  Saccharophagus degradans 2-40  Bacteria  normal  0.0441023  normal  0.46066 
 
 
-
 
NC_013502  Rmar_2870  methyl-accepting chemotaxis sensory transducer  36.05 
 
 
636 aa  123  7e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
622 aa  123  7e-27  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009656  PSPA7_2234  putative chemotaxis transducer  30.72 
 
 
545 aa  122  8e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
411 aa  123  8e-27  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
541 aa  122  9e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
549 aa  122  9e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0840  cache domain-contain protein  30.43 
 
 
566 aa  121  1.9999999999999998e-26  Campylobacter concisus 13826  Bacteria  normal  0.287851  n/a   
 
 
-
 
NC_010506  Swoo_3605  methyl-accepting chemotaxis sensory transducer  31.39 
 
 
666 aa  121  1.9999999999999998e-26  Shewanella woodyi ATCC 51908  Bacteria  normal  0.644417  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  31.82 
 
 
639 aa  121  1.9999999999999998e-26  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
541 aa  122  1.9999999999999998e-26  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  28.27 
 
 
541 aa  121  1.9999999999999998e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0995  methyl-accepting chemotaxis protein  35.47 
 
 
557 aa  122  1.9999999999999998e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.467879  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  35.94 
 
 
633 aa  122  1.9999999999999998e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
646 aa  122  1.9999999999999998e-26  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  36.77 
 
 
622 aa  121  1.9999999999999998e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  40.88 
 
 
714 aa  122  1.9999999999999998e-26  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1789  chemotaxis sensory transducer  37.67 
 
 
546 aa  121  1.9999999999999998e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.478165  decreased coverage  0.000703042 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  31.61 
 
 
642 aa  121  1.9999999999999998e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
548 aa  121  1.9999999999999998e-26  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  30.11 
 
 
630 aa  121  1.9999999999999998e-26  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  30.11 
 
 
630 aa  121  1.9999999999999998e-26  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  39.37 
 
 
541 aa  120  3e-26  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  31.74 
 
 
622 aa  121  3e-26  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  31.4 
 
 
671 aa  121  3e-26  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_013422  Hneap_0470  methyl-accepting chemotaxis sensory transducer  32.32 
 
 
668 aa  120  3e-26  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  30.11 
 
 
630 aa  121  3e-26  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.11 
 
 
630 aa  121  3e-26  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05097  sensor protein TorS  31.16 
 
 
542 aa  120  3e-26  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  27.83 
 
 
522 aa  121  3e-26  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  34.87 
 
 
658 aa  120  3.9999999999999996e-26  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_5093  histidine kinase, HAMP region: chemotaxis sensory transducer  29.63 
 
 
676 aa  120  3.9999999999999996e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  41.99 
 
 
521 aa  120  3.9999999999999996e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_008009  Acid345_1774  methyl-accepting chemotaxis sensory transducer  31.95 
 
 
671 aa  120  3.9999999999999996e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  35.84 
 
 
541 aa  120  4.9999999999999996e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  29.57 
 
 
630 aa  120  4.9999999999999996e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  31.21 
 
 
688 aa  120  4.9999999999999996e-26  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
541 aa  120  4.9999999999999996e-26  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
541 aa  120  4.9999999999999996e-26  Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  34.51 
 
 
628 aa  120  6e-26  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  32.85 
 
 
642 aa  120  6e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
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