More than 300 homologs were found in PanDaTox collection
for query gene Sde_0343 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_0343  methyl-accepting chemotaxis sensory transducer  100 
 
 
547 aa  1098    Saccharophagus degradans 2-40  Bacteria  normal  0.0441023  normal  0.46066 
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  41.22 
 
 
539 aa  401  9.999999999999999e-111  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0143  methyl-accepting chemotaxis sensory transducer  41 
 
 
539 aa  369  1e-101  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2331  methyl-accepting chemotaxis sensory transducer  34.56 
 
 
538 aa  261  2e-68  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.797541  n/a   
 
 
-
 
NC_007954  Sden_1600  chemotaxis sensory transducer  32.6 
 
 
538 aa  253  5.000000000000001e-66  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00759873  n/a   
 
 
-
 
NC_009052  Sbal_3067  methyl-accepting chemotaxis sensory transducer  31.35 
 
 
539 aa  243  7e-63  Shewanella baltica OS155  Bacteria  normal  0.0971462  n/a   
 
 
-
 
NC_009665  Shew185_3077  methyl-accepting chemotaxis sensory transducer  31.17 
 
 
539 aa  243  7e-63  Shewanella baltica OS185  Bacteria  normal  0.417897  n/a   
 
 
-
 
NC_009997  Sbal195_3220  methyl-accepting chemotaxis sensory transducer  31.55 
 
 
539 aa  241  2.9999999999999997e-62  Shewanella baltica OS195  Bacteria  normal  0.0243326  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  40.51 
 
 
559 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3010  chemotaxis sensory transducer  33.15 
 
 
539 aa  234  3e-60  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0622  putative methyl-accepting chemotaxis sensory transducer  34.02 
 
 
539 aa  234  3e-60  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.321986 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
568 aa  230  6e-59  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0524  methyl-accepting chemotaxis sensory transducer  31.91 
 
 
539 aa  229  1e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
716 aa  227  3e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  37.22 
 
 
712 aa  228  3e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
560 aa  227  5.0000000000000005e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  41.25 
 
 
560 aa  226  7e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  38.89 
 
 
541 aa  226  8e-58  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.93 
 
 
712 aa  225  1e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  37.96 
 
 
713 aa  224  3e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  37.37 
 
 
702 aa  223  4.9999999999999996e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
636 aa  223  7e-57  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
544 aa  218  2e-55  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  39.46 
 
 
545 aa  218  2e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
552 aa  215  1.9999999999999998e-54  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  35.83 
 
 
549 aa  215  1.9999999999999998e-54  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
544 aa  214  2.9999999999999995e-54  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  41.37 
 
 
637 aa  214  3.9999999999999995e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
438 aa  214  3.9999999999999995e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  39.72 
 
 
634 aa  213  4.9999999999999996e-54  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_2823  methyl-accepting chemotaxis transducer  29.01 
 
 
550 aa  212  2e-53  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  40.24 
 
 
561 aa  212  2e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  40.24 
 
 
561 aa  211  2e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.64 
 
 
630 aa  211  3e-53  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
634 aa  211  3e-53  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  38.64 
 
 
630 aa  211  3e-53  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  38.64 
 
 
630 aa  211  3e-53  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  38.64 
 
 
630 aa  211  3e-53  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  39.32 
 
 
630 aa  210  5e-53  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  36.38 
 
 
544 aa  210  5e-53  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I1951  methyl-accepting chemotaxis protein  37.13 
 
 
720 aa  209  8e-53  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
544 aa  207  3e-52  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
630 aa  207  3e-52  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  38.31 
 
 
638 aa  207  3e-52  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009656  PSPA7_2234  putative chemotaxis transducer  37.95 
 
 
545 aa  207  5e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  37.16 
 
 
638 aa  206  7e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
630 aa  206  9e-52  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
674 aa  205  1e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  38.6 
 
 
411 aa  205  1e-51  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
634 aa  206  1e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
630 aa  206  1e-51  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  38.72 
 
 
645 aa  204  2e-51  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  37.93 
 
 
548 aa  205  2e-51  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009997  Sbal195_3549  methyl-accepting chemotaxis sensory transducer  37.32 
 
 
548 aa  204  3e-51  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3424  methyl-accepting chemotaxis sensory transducer  37.32 
 
 
548 aa  204  3e-51  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  38.72 
 
 
645 aa  204  3e-51  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_011663  Sbal223_3352  methyl-accepting chemotaxis sensory transducer  37.32 
 
 
573 aa  204  3e-51  Shewanella baltica OS223  Bacteria  normal  0.729863  normal 
 
 
-
 
NC_009052  Sbal_0938  methyl-accepting chemotaxis sensory transducer  37.32 
 
 
548 aa  204  3e-51  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
552 aa  204  4e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  34.3 
 
 
546 aa  204  5e-51  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  35.81 
 
 
546 aa  204  5e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  35.88 
 
 
543 aa  203  5e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  37.75 
 
 
541 aa  203  7e-51  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  37.89 
 
 
533 aa  202  9e-51  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
645 aa  202  9.999999999999999e-51  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  33.15 
 
 
673 aa  201  1.9999999999999998e-50  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  34.54 
 
 
553 aa  202  1.9999999999999998e-50  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.33 
 
 
628 aa  201  1.9999999999999998e-50  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  38.6 
 
 
636 aa  202  1.9999999999999998e-50  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3644  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
378 aa  201  1.9999999999999998e-50  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
541 aa  201  3e-50  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  35.6 
 
 
640 aa  201  3e-50  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  35.82 
 
 
637 aa  201  3e-50  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  40.13 
 
 
544 aa  201  3e-50  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  31.93 
 
 
541 aa  201  3.9999999999999996e-50  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  36.46 
 
 
542 aa  201  3.9999999999999996e-50  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  36.21 
 
 
541 aa  201  3.9999999999999996e-50  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  36.54 
 
 
546 aa  200  5e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
628 aa  200  6e-50  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  38.19 
 
 
545 aa  200  6e-50  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
544 aa  199  7e-50  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  37.36 
 
 
558 aa  200  7e-50  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  34.75 
 
 
645 aa  200  7e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  40.19 
 
 
624 aa  199  1.0000000000000001e-49  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  38.91 
 
 
630 aa  199  1.0000000000000001e-49  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
645 aa  199  1.0000000000000001e-49  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  35.44 
 
 
605 aa  199  1.0000000000000001e-49  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  34.54 
 
 
541 aa  198  2.0000000000000003e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  40.71 
 
 
664 aa  198  2.0000000000000003e-49  Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  35.86 
 
 
533 aa  198  2.0000000000000003e-49  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  35.23 
 
 
643 aa  197  3e-49  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_002947  PP_1940  methyl-accepting chemotaxis transducer  34.3 
 
 
716 aa  197  4.0000000000000005e-49  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.00000108039 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
541 aa  197  4.0000000000000005e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  32.58 
 
 
658 aa  197  4.0000000000000005e-49  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
632 aa  197  4.0000000000000005e-49  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  36.01 
 
 
646 aa  197  5.000000000000001e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_007520  Tcr_1999  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
405 aa  197  5.000000000000001e-49  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  35.61 
 
 
640 aa  196  6e-49  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.06 
 
 
626 aa  196  7e-49  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  35.88 
 
 
646 aa  196  8.000000000000001e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
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