More than 300 homologs were found in PanDaTox collection
for query gene Pmen_1353 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_1353  methyl-accepting chemotaxis sensory transducer  100 
 
 
547 aa  1085    Pseudomonas mendocina ymp  Bacteria  normal  0.769572  normal 
 
 
-
 
NC_008740  Maqu_3809  methyl-accepting chemotaxis sensory transducer  61.72 
 
 
547 aa  625  1e-178  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0341  methyl-accepting chemotaxis sensory transducer  56.15 
 
 
544 aa  555  1e-157  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3685  methyl-accepting chemotaxis protein  57.72 
 
 
546 aa  554  1e-156  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1789  chemotaxis sensory transducer  56.8 
 
 
546 aa  538  9.999999999999999e-153  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.478165  decreased coverage  0.000703042 
 
 
-
 
NC_009438  Sputcn32_0513  methyl-accepting chemotaxis sensory transducer  44.55 
 
 
542 aa  410  1e-113  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_2256  chemotaxis sensory transducer  33.7 
 
 
548 aa  281  2e-74  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000776973  n/a   
 
 
-
 
NC_008599  CFF8240_0065  methyl-accepting chemotaxis protein  33.39 
 
 
548 aa  277  4e-73  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.826549  n/a   
 
 
-
 
NC_011312  VSAL_I1636  methyl-accepting chemotaxis protein  34.97 
 
 
547 aa  276  9e-73  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0033  methyl-accepting chemotaxis sensory transducer  33.76 
 
 
593 aa  269  8.999999999999999e-71  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.684678  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  46.65 
 
 
636 aa  243  7.999999999999999e-63  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  47.92 
 
 
637 aa  237  4e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  34.53 
 
 
543 aa  231  2e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  47.44 
 
 
624 aa  231  2e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  35.03 
 
 
541 aa  229  7e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  42.22 
 
 
652 aa  229  8e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  42.43 
 
 
646 aa  229  9e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  35.65 
 
 
541 aa  228  2e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
650 aa  228  2e-58  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  35.3 
 
 
541 aa  228  2e-58  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  35.45 
 
 
541 aa  228  3e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  43.62 
 
 
533 aa  225  2e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  37.59 
 
 
570 aa  224  3e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
572 aa  223  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
638 aa  223  9.999999999999999e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  41.01 
 
 
647 aa  221  1.9999999999999999e-56  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  41.24 
 
 
425 aa  222  1.9999999999999999e-56  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  40.06 
 
 
550 aa  221  3e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0641  methyl-accepting chemotaxis sensory transducer  31.08 
 
 
537 aa  221  3e-56  Dickeya zeae Ech1591  Bacteria  normal  0.245653  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  46.26 
 
 
647 aa  219  7e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  40.78 
 
 
647 aa  219  8.999999999999998e-56  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  32.32 
 
 
541 aa  219  1e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.46 
 
 
523 aa  219  1e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  42.35 
 
 
638 aa  219  1e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  41.41 
 
 
533 aa  219  1e-55  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  43.52 
 
 
638 aa  218  2e-55  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  39.01 
 
 
640 aa  218  2e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  42.61 
 
 
411 aa  218  2.9999999999999998e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  41.19 
 
 
546 aa  217  4e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  40.56 
 
 
638 aa  217  4e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  43.64 
 
 
773 aa  216  9.999999999999999e-55  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_011992  Dtpsy_2395  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
572 aa  215  1.9999999999999998e-54  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
533 aa  215  1.9999999999999998e-54  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_007005  Psyr_1150  chemotaxis sensory transducer  39.53 
 
 
551 aa  215  1.9999999999999998e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.52 
 
 
533 aa  215  1.9999999999999998e-54  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
739 aa  214  2.9999999999999995e-54  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.46 
 
 
541 aa  214  2.9999999999999995e-54  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
634 aa  214  3.9999999999999995e-54  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  32.85 
 
 
541 aa  214  3.9999999999999995e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
638 aa  214  3.9999999999999995e-54  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_010501  PputW619_0444  methyl-accepting chemotaxis sensory transducer  42.25 
 
 
647 aa  214  4.9999999999999996e-54  Pseudomonas putida W619  Bacteria  normal  0.414929  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  40.68 
 
 
639 aa  213  7e-54  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_008782  Ajs_2968  methyl-accepting chemotaxis sensory transducer  33.51 
 
 
572 aa  213  7.999999999999999e-54  Acidovorax sp. JS42  Bacteria  normal  normal  0.536058 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  43.08 
 
 
541 aa  213  9e-54  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
638 aa  213  1e-53  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  36.58 
 
 
541 aa  212  1e-53  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  43.3 
 
 
573 aa  213  1e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2301  methyl-accepting chemotaxis sensory transducer  36.41 
 
 
632 aa  212  1e-53  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  32.21 
 
 
573 aa  212  1e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  43.43 
 
 
548 aa  211  2e-53  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  40.72 
 
 
640 aa  211  3e-53  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
638 aa  211  3e-53  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
541 aa  211  3e-53  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3218  methyl-accepting chemotaxis sensory transducer  32.23 
 
 
551 aa  211  4e-53  Pseudomonas mendocina ymp  Bacteria  normal  0.359634  normal  0.412717 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  44.58 
 
 
679 aa  211  4e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  40.34 
 
 
642 aa  210  5e-53  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  43.89 
 
 
555 aa  210  6e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  44.59 
 
 
716 aa  210  6e-53  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  42.09 
 
 
546 aa  209  9e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  42.42 
 
 
541 aa  209  1e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
541 aa  209  1e-52  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  39.09 
 
 
642 aa  208  2e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  39.39 
 
 
541 aa  208  2e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
564 aa  207  3e-52  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  39.44 
 
 
640 aa  207  3e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  37 
 
 
546 aa  207  4e-52  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  39.7 
 
 
552 aa  207  4e-52  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  39.7 
 
 
552 aa  207  4e-52  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  35.81 
 
 
547 aa  206  8e-52  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  40.45 
 
 
542 aa  206  8e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  35.27 
 
 
596 aa  206  9e-52  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  38 
 
 
668 aa  206  9e-52  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  46.34 
 
 
552 aa  206  1e-51  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  37.85 
 
 
541 aa  205  2e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  43.79 
 
 
629 aa  205  2e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  46.9 
 
 
647 aa  204  2e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_009831  Ssed_1012  hypothetical protein  37.57 
 
 
626 aa  205  2e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  43.58 
 
 
712 aa  205  2e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  41.51 
 
 
541 aa  204  2e-51  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_010501  PputW619_2593  methyl-accepting chemotaxis sensory transducer  30.32 
 
 
540 aa  204  3e-51  Pseudomonas putida W619  Bacteria  normal  normal  0.591477 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  44.14 
 
 
674 aa  204  3e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  45.92 
 
 
647 aa  204  4e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  42.91 
 
 
713 aa  204  4e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  36.46 
 
 
636 aa  204  4e-51  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  41.01 
 
 
676 aa  203  5e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  42.86 
 
 
681 aa  204  5e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
541 aa  204  5e-51  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  35.6 
 
 
536 aa  204  5e-51  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  41.85 
 
 
638 aa  203  5e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_008577  Shewana3_3924  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
527 aa  203  6e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
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