| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1353 |
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| Symbol | |
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| ID | 5109406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1513295 |
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| End bp | 1514938 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502581 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001186850 |
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| Protein GI | 146306385 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.769572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCC CCATGAGTAT TGCCCAGCGT CTGAGCTTGG GCTTTGGCCT GGTGCTGTCG
CTAATGGTTC TTATCGCGCT CATCGGTGTG CAGCGCGTCG GTTTCATCGA CGAGACGCTG
ACCGCTGTCA GCGACGGCGC CGCGCTGAAG CAGCGCTACG CCATCAACTT TCGTGGCAGC
GTGCATGATC GCGCCATCGC CATTCGCGAT GCGGTACTGG ATGGCGATGG CGCGGCGTTG
GCCGGGCACC TGGGCGAGAT CCAGCGTCTC GATCGCTTCT ATCAGGAATC GGCGCAAGCC
ATGGAAACGC TGCTGGCGAA GCAGGCGCCC ACGGCAGCGG AGCAGCGCCT TCTGGATAAC
ATCAAGACCA TCGAGCGCAG CACGCTGGCG CTGACCGAGC AGTTGATCAG CCTGCGCCGC
ACCGGCAATG AAGCGGCGCT GCCGCTGTTG ATGGAGCGGG TCTCTCCGGC TTACAGCGAG
TGGCTCAAGC ACATCAATGC CTTTATCGAT CACCAGGAAG AGGCCATCAG CCAGGATTTG
GGCGAGGTGC GCGAGGTGGC CGGTGGCTTC CGCTTGCTGA TTCTGCTGGT CACGGGCGCT
GCCTTGCTGC TGAGCGTGGG CATCAGCCTG GTGATCATCA ACACGTTGAA GTCGACACTG
GGCGCCGAGC CACACCGGGT CGCGCAGGTG ATTCAGCAGT TGGCCAAGGG TGAGCTCGAT
CAACAGATCG AGACGCAGTA TCCGAATAGC GTGATGGCGG ATCTGCAGAA CATGGTGCGC
CACCTGAGCG ACACCATCGC GCAGGTACGC AGTGCGGCAA CGGAGCTGAC TCACTCGTCG
GATCAGTTGA TGTCCACTTC CGACAGCAAC AACCAGCAGA TTCGCCTGCA ATCGAGCGAG
GCCGAGCAGA TGGCCACGGC GATCAATCAG ATGGCCGCCA CGGTCAGCGA AGTGGCCAAC
TATGCCGCCA GCGCAGCAGC CGCCACACGC AACGCCGGCG GTGAGGTGAC CATTGGCAAT
CGCGTGGTGA ACGAGACGGC AAACGCCATC CAGACGTTGG CGCGCACCCT TGAGAGCGCA
ACGCAAAGCG TGCAGCAGGT TTCCAGCGAC AGCGAGAGCA TCGAAAAGAT CATCGAGGTG
ATCACCTCCA TCGCCGAACA GACCAACCTG CTGGCGCTCA ACGCGGCCAT CGAGGCTGCC
CGAGCGGGTG AGCACGGACG CGGCTTTGCC GTGGTGGCGG ACGAGGTACG TTCTCTGGCA
ACCCGCACCC AGGACTCGAC ACGGGAAATT CGCGGCATGA TCGCCAAGCT CCAGGAAGGC
GCCGGCAAGG CCGCAGAGGT GATGCTCGAG AGCCGTCAAC TGGCGCAGAA GACCGTCGAG
CAGACCGTCC TGGCAGAACA AGCGCTGAGC AAGATCAGTG ACGAAGTGAC CGCGATCAAC
GACATGAACG CACAGATCGC CAGCGCCTCG GAACAGCAAA GCGCGGTCGC CGAGGAGGTC
AACCAGAACA TCAGCCGCAT CCACAACGCG ACCCTGGAAA CCTCCGCCGG CTCGGAGCAG
GTGGCGGCCT CCAGCCAGGA GCTGGCAACC CTGGCGAACC GCCTGACCGA CAAGGTGAGC
TTCTTCAAGG TGCGGGCAGC CTGA
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| Protein sequence | MNSPMSIAQR LSLGFGLVLS LMVLIALIGV QRVGFIDETL TAVSDGAALK QRYAINFRGS
VHDRAIAIRD AVLDGDGAAL AGHLGEIQRL DRFYQESAQA METLLAKQAP TAAEQRLLDN
IKTIERSTLA LTEQLISLRR TGNEAALPLL MERVSPAYSE WLKHINAFID HQEEAISQDL
GEVREVAGGF RLLILLVTGA ALLLSVGISL VIINTLKSTL GAEPHRVAQV IQQLAKGELD
QQIETQYPNS VMADLQNMVR HLSDTIAQVR SAATELTHSS DQLMSTSDSN NQQIRLQSSE
AEQMATAINQ MAATVSEVAN YAASAAAATR NAGGEVTIGN RVVNETANAI QTLARTLESA
TQSVQQVSSD SESIEKIIEV ITSIAEQTNL LALNAAIEAA RAGEHGRGFA VVADEVRSLA
TRTQDSTREI RGMIAKLQEG AGKAAEVMLE SRQLAQKTVE QTVLAEQALS KISDEVTAIN
DMNAQIASAS EQQSAVAEEV NQNISRIHNA TLETSAGSEQ VAASSQELAT LANRLTDKVS
FFKVRAA
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