| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0995 |
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| Symbol | |
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| ID | 1182629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1085145 |
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| End bp | 1086818 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392377 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_790834 |
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| Protein GI | 28868215 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.467879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAAGT TTCTGCCTCG TTTTCTACGT CGGCGAACGA CAACAACCGT GTTGCGCCGC
TTCAAGATCA CCCCGCGCCT GGTGATCTGC TTTGGAATCA CCTCTCTGCT GACGGTCGCA
CTGGGCGCAT TTTGCCTGCT GCAGATGCAG GAAATCCGCA ATCAGAGCGA AACGGTCGAA
AGCGGTGCGC TGCCGAGTAT TGCTATGGCC GACGCCATCG CCATCGGCCT GGTCAAACTG
CGCAGCGAAA CCACCCGCCT GATCGCCAAC GCTGATGATC CGGGATCGGT CATCAACAGC
AAGATAAACG TCGAACAGCT CAGAAACGAG GTCGAGAAAG GTTTCTCGGA ATACCTCGCA
CGTGTGCAAT CAGGCACCGA ACATGATTCG ATCATCGCGC TACAGGACGC TTATAAAGCC
TTTATGCCGG GCTTGCAGGA ACAGATCGCG CTGATTGAAC AGAACAAACT GGATGAGGCC
AGAATGCTGG CCAACACCAT GCTCACGCTG CAGGGCGACC TGATGGACAT GCAGGTGCAG
TTGCTGCGAG AGCTGAACAA GCAGAGTGCC GCCAGCGCTG TAGACGCGGC CGGAGCCAGT
TACGCACAAG CGCGAATTAT CGCCCTGAGC GCCATCGCCG TCGTATTGAC GCTAACCCTG
CTGCTGGCGT GGCGCCTGAG CGTCAGCATC ATTCATCCAG TGCGCCAGGC GTTGCACATC
GCCAGCACCA TCGCCGATGG CGACCTGACT GAACACCAGA TTGCCGACGG CAAGGACGAA
ACCGCGCAAT TATTGATCAC CCTCGGGCGC ATGCGGACCA ACCTGCACGG TACGATCGAG
CAAATTTATG CGGCGGCCAC CCAGTTGTCG CAGTCGGTGC AGGAGATGGG CACCATCGCC
GAGGTCAGCG CGCTCAATCT GCAATTACAG AACACCGAAA TCGAACAGGC TGCGGTCGCC
GTCAACCAGA TGAGCCAGGC GGCCGTCGAG GTGGCGGGCA ATGCCAGCAA TACTGTGACT
GAATCCGAGG CCTCGACCCA GGCCGCGGCG CAGGGTCAGA ACAAGCTCTC GGCAACCATC
AGTTCGATCA AGGAGCTGAC CGAAAACGTG CTGGACTCTT CGCATCAAGC CGAAGGGCTG
GCCGAACGCA CGCAAAGCAT CAGCAGCATC CTCGATGTGA TTCGTGCGAT TGCCAACCAG
ACCAATCTGC TCGCCCTGAA TGCCGCGATC GAAGCCGCAC GTGCAGGCGA AGCCGGGCGC
GGGTTTGCCG TGGTGGCCGA TGAAGTACGC TCGCTGGCGC AACGTACCAG TGCGTCTACC
GCAGAAATCG AAGGGTTGAT CAGCGGCGTG CAACAAAGTA CCCAGCAAAC TGCCAGTTCA
CTGCGCCACA CGGCAACCCA GGCAAACCTG ACACTCGAAC AGGCTGCATC GACCGGCGCA
GCGTTGACAG TGATCATCAA TGCGACTGCC ACGATCAATG ATCGCAACCT GTTGATCGCC
AGCGCCGCCG AGCAGCAGGC GCAAGTTGCG GGCGAAGTGG ACCGTAACCT GAGCAGCATT
CGCGATCTTT CCAGTCAGAC GGCTTCAGGC GCACAGCAAA CCACCGTCGC GAGCAACGCA
CTGTCGATGC TGGCGACGGA CCTGAACCTG ATGGTCCAGC GGTTTGTGCT TTGA
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| Protein sequence | MKKFLPRFLR RRTTTTVLRR FKITPRLVIC FGITSLLTVA LGAFCLLQMQ EIRNQSETVE
SGALPSIAMA DAIAIGLVKL RSETTRLIAN ADDPGSVINS KINVEQLRNE VEKGFSEYLA
RVQSGTEHDS IIALQDAYKA FMPGLQEQIA LIEQNKLDEA RMLANTMLTL QGDLMDMQVQ
LLRELNKQSA ASAVDAAGAS YAQARIIALS AIAVVLTLTL LLAWRLSVSI IHPVRQALHI
ASTIADGDLT EHQIADGKDE TAQLLITLGR MRTNLHGTIE QIYAAATQLS QSVQEMGTIA
EVSALNLQLQ NTEIEQAAVA VNQMSQAAVE VAGNASNTVT ESEASTQAAA QGQNKLSATI
SSIKELTENV LDSSHQAEGL AERTQSISSI LDVIRAIANQ TNLLALNAAI EAARAGEAGR
GFAVVADEVR SLAQRTSAST AEIEGLISGV QQSTQQTASS LRHTATQANL TLEQAASTGA
ALTVIINATA TINDRNLLIA SAAEQQAQVA GEVDRNLSSI RDLSSQTASG AQQTTVASNA
LSMLATDLNL MVQRFVL
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