174 homologs were found in PanDaTox collection
for query gene Ndas_2108 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_2108  HAD-superfamily hydrolase, subfamily IA, variant 3  100 
 
 
203 aa  404  1.0000000000000001e-112  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.133386  normal 
 
 
-
 
NC_013510  Tcur_3350  HAD-superfamily hydrolase, subfamily IA, variant 3  50 
 
 
205 aa  166  2e-40  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00377718  n/a   
 
 
-
 
NC_008009  Acid345_0142  HAD family hydrolase  32.97 
 
 
212 aa  113  2.0000000000000002e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  hitchhiker  0.0023385 
 
 
-
 
NC_013159  Svir_38090  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  34.2 
 
 
194 aa  111  8.000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.516929  normal 
 
 
-
 
NC_007333  Tfu_2117  HAD family hydrolase  40.43 
 
 
210 aa  111  9e-24  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7538  hydrolase (HAD superfamily)-like protein  39.25 
 
 
232 aa  103  2e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.763652 
 
 
-
 
NC_013131  Caci_7952  HAD-superfamily hydrolase, subfamily IA, variant 3  33.5 
 
 
206 aa  96.7  2e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6895  HAD-superfamily hydrolase, subfamily IA, variant 3  36.98 
 
 
195 aa  90.9  1e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_11470  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  35.45 
 
 
230 aa  82.8  0.000000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.241013  n/a   
 
 
-
 
NC_010524  Lcho_3384  HAD family hydrolase  41.24 
 
 
206 aa  72.8  0.000000000004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008025  Dgeo_1288  HAD family hydrolase  29.45 
 
 
212 aa  66.2  0.0000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.888389  normal 
 
 
-
 
NC_014148  Plim_2884  Haloacid dehalogenase domain protein hydrolase  28.14 
 
 
202 aa  64.3  0.000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_18080  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  37.25 
 
 
211 aa  64.3  0.000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.588171  normal  0.386622 
 
 
-
 
NC_009511  Swit_3116  HAD family hydrolase  34.91 
 
 
193 aa  63.5  0.000000002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.441667 
 
 
-
 
NC_008025  Dgeo_1113  HAD family hydrolase  35.11 
 
 
228 aa  59.7  0.00000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.107985  hitchhiker  0.0043155 
 
 
-
 
NC_008825  Mpe_A3093  hypothetical protein  31.33 
 
 
209 aa  59.7  0.00000003  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.368672 
 
 
-
 
NC_007794  Saro_0570  epoxide hydrolase domain-containing phosphatase  31.07 
 
 
214 aa  58.9  0.00000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.457347  n/a   
 
 
-
 
NC_010676  Bphyt_5336  HAD-superfamily hydrolase, subfamily IA, variant 3  30.15 
 
 
204 aa  58.5  0.00000006  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0572  HAD family hydrolase  30.43 
 
 
207 aa  57  0.0000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.112395  n/a   
 
 
-
 
NC_009719  Plav_2026  HAD family hydrolase  33.98 
 
 
203 aa  56.6  0.0000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.151114  normal  0.583157 
 
 
-
 
NC_013530  Xcel_1720  HAD-superfamily hydrolase, subfamily IA, variant 3  37.25 
 
 
209 aa  56.6  0.0000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  hitchhiker  0.00306678  n/a   
 
 
-
 
NC_008048  Sala_2997  HAD family hydrolase  31.82 
 
 
203 aa  56.6  0.0000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.155804 
 
 
-
 
NC_009718  Fnod_0412  HAD family hydrolase  30.19 
 
 
223 aa  56.2  0.0000003  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2208  HAD-superfamily hydrolase, subfamily IA, variant 3  28 
 
 
204 aa  55.8  0.0000004  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010003  Pmob_0976  HAD family hydrolase  28.3 
 
 
198 aa  55.5  0.0000005  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4881  HAD family hydrolase  27.04 
 
 
211 aa  55.5  0.0000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2946  HAD family hydrolase  30.58 
 
 
378 aa  54.3  0.000001  Geobacter metallireducens GS-15  Bacteria  normal  0.913197  normal  0.0128991 
 
 
-
 
NC_008048  Sala_2121  epoxide hydrolase domain-containing phosphatase  29.7 
 
 
215 aa  54.7  0.000001  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.581961  normal 
 
 
-
 
NC_008347  Mmar10_2528  HAD family hydrolase  33.93 
 
 
204 aa  54.3  0.000001  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0579  HAD-superfamily hydrolase  28.57 
 
 
204 aa  53.5  0.000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0441  putative L-2-haloalkanoic acid dehalogenase (HAD aspartate-nucleophile hydrolase)  31.62 
 
 
207 aa  53.1  0.000002  Burkholderia xenovorans LB400  Bacteria  normal  0.238349  normal 
 
 
-
 
NC_008835  BMA10229_0888  HAD-superfamily hydrolase  28.57 
 
 
217 aa  53.5  0.000002  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1918  HAD family hydrolase  28.57 
 
 
217 aa  53.5  0.000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1855  HAD family hydrolase  28.57 
 
 
204 aa  53.5  0.000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0720  HAD family hydrolase  30.46 
 
 
292 aa  53.9  0.000002  Salinispora tropica CNB-440  Bacteria  normal  normal  0.070073 
 
 
-
 
NC_013510  Tcur_3178  Haloacid dehalogenase domain protein hydrolase  33.33 
 
 
230 aa  53.5  0.000002  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00001464  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0436  HAD-superfamily hydrolase  28.57 
 
 
268 aa  52.8  0.000003  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0651  HAD-superfamily hydrolase, subfamily IA, variant 3  27.1 
 
 
205 aa  53.1  0.000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.286753 
 
 
-
 
NC_009075  BURPS668_A2011  HAD-superfamily hydrolase  28.57 
 
 
204 aa  53.1  0.000003  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2805  HAD family hydrolase  30.87 
 
 
208 aa  52.4  0.000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.187459 
 
 
-
 
NC_008044  TM1040_2669  HAD family hydrolase  33.91 
 
 
206 aa  52.4  0.000004  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1176  HAD family hydrolase  34.13 
 
 
337 aa  52.4  0.000004  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00246579  normal  0.129694 
 
 
-
 
NC_013131  Caci_5250  HAD-superfamily hydrolase, subfamily IA, variant 3  36.3 
 
 
227 aa  52.4  0.000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.922708  normal 
 
 
-
 
NC_007908  Rfer_1128  HAD family hydrolase  34.12 
 
 
214 aa  52  0.000006  Rhodoferax ferrireducens T118  Bacteria  normal  0.893823  n/a   
 
 
-
 
NC_007952  Bxe_B1265  HAD family hydrolase  29.06 
 
 
204 aa  52  0.000006  Burkholderia xenovorans LB400  Bacteria  normal  0.489087  normal 
 
 
-
 
NC_013421  Pecwa_4501  phosphatase  24.61 
 
 
203 aa  52  0.000006  Pectobacterium wasabiae WPP163  Bacteria  normal  0.355951  n/a   
 
 
-
 
NC_013510  Tcur_4019  HAD-superfamily hydrolase, subfamily IA, variant 3  37.35 
 
 
232 aa  51.6  0.000007  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0842123  n/a   
 
 
-
 
NC_012850  Rleg_0706  HAD-superfamily hydrolase, subfamily IA, variant 3  27.1 
 
 
204 aa  51.6  0.000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.182073  normal 
 
 
-
 
NC_010681  Bphyt_3517  HAD-superfamily hydrolase, subfamily IA, variant 3  31.71 
 
 
207 aa  50.8  0.00001  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00913759  normal  0.088603 
 
 
-
 
NC_013739  Cwoe_1828  HAD-superfamily hydrolase, subfamily IA, variant 3  33.64 
 
 
211 aa  51.2  0.00001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.978388 
 
 
-
 
NC_009441  Fjoh_0002  HAD family hydrolase  26.54 
 
 
200 aa  50.8  0.00001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.142779  n/a   
 
 
-
 
NC_011004  Rpal_3244  HAD-superfamily hydrolase, subfamily IA, variant 3  28.28 
 
 
208 aa  51.2  0.00001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2434  HAD-superfamily hydrolase, subfamily IA, variant 3  35 
 
 
298 aa  51.2  0.00001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2835  HAD family hydrolase  30.05 
 
 
231 aa  50.4  0.00002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.160416  normal 
 
 
-
 
NC_012669  Bcav_2047  HAD-superfamily hydrolase, subfamily IA, variant 3  34.31 
 
 
211 aa  50.1  0.00002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.044759 
 
 
-
 
NC_009636  Smed_0542  HAD family hydrolase  27.68 
 
 
219 aa  50.1  0.00002  Sinorhizobium medicae WSM419  Bacteria  normal  0.0173803  normal  0.811025 
 
 
-
 
NC_009972  Haur_2677  HAD family hydrolase  37.14 
 
 
222 aa  50.1  0.00002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4218  phosphatase  23.56 
 
 
203 aa  49.7  0.00003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_0468  HAD family hydrolase  27.84 
 
 
202 aa  49.7  0.00003  Elusimicrobium minutum Pei191  Bacteria  normal  0.85334  hitchhiker  0.00430907 
 
 
-
 
NC_009921  Franean1_3961  HAD family hydrolase  31.4 
 
 
243 aa  50.1  0.00003  Frankia sp. EAN1pec  Bacteria  normal  0.389066  normal  0.14161 
 
 
-
 
NC_008699  Noca_0887  HAD family hydrolase  34.31 
 
 
206 aa  49.3  0.00004  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4147  HAD-superfamily hydrolase, subfamily IA, variant 3  31.45 
 
 
220 aa  49.3  0.00004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7621  HAD-superfamily hydrolase, subfamily IA, variant 3  44.23 
 
 
200 aa  48.5  0.00006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A3453  HAD family hydrolase  26.04 
 
 
204 aa  48.5  0.00006  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3580  HAD-superfamily hydrolase, subfamily IA, variant 3  32.14 
 
 
212 aa  48.1  0.0001  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2236  HAD-superfamily hydrolase, subfamily IA, variant 3  29.36 
 
 
214 aa  47.8  0.0001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3459  HAD-superfamily hydrolase, subfamily IA, variant 3  33.63 
 
 
216 aa  47  0.0002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0792688  n/a   
 
 
-
 
NC_011368  Rleg2_4436  HAD-superfamily hydrolase, subfamily IA, variant 3  30.86 
 
 
216 aa  47  0.0002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00258568  normal 
 
 
-
 
NC_011769  DvMF_1787  Haloacid dehalogenase domain protein hydrolase  28.43 
 
 
218 aa  47  0.0002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.170193 
 
 
-
 
NC_011884  Cyan7425_3373  HAD-superfamily hydrolase, subfamily IA, variant 3  26.56 
 
 
231 aa  47  0.0002  Cyanothece sp. PCC 7425  Bacteria  normal  0.154909  normal  0.78527 
 
 
-
 
NC_014210  Ndas_3728  HAD-superfamily hydrolase, subfamily IA, variant 3  39.47 
 
 
224 aa  47  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.93668  normal 
 
 
-
 
NC_013159  Svir_30870  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  40.74 
 
 
133 aa  47  0.0002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0979  HAD-superfamily hydrolase  27.09 
 
 
204 aa  46.2  0.0003  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0571  HAD family hydrolase  40.98 
 
 
203 aa  46.2  0.0003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1551  HAD family hydrolase  31.37 
 
 
224 aa  46.6  0.0003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1742  Haloacid dehalogenase domain protein hydrolase  34.65 
 
 
204 aa  46.6  0.0003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.0641396  n/a   
 
 
-
 
NC_010513  Xfasm12_0542  hydrolase  42.86 
 
 
225 aa  46.2  0.0003  Xylella fastidiosa M12  Bacteria  normal  0.491879  n/a   
 
 
-
 
NC_007951  Bxe_A0636  HAD family hydrolase  37.33 
 
 
252 aa  45.4  0.0006  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0492  HAD superfamily hydrolase  28.18 
 
 
205 aa  44.7  0.0008  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3679  phosphoglycolate phosphatase  28.57 
 
 
252 aa  45.1  0.0008  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.966867  normal 
 
 
-
 
NC_011149  SeAg_B3681  phosphoglycolate phosphatase  28.57 
 
 
252 aa  45.1  0.0008  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.123155  n/a   
 
 
-
 
NC_011080  SNSL254_A3754  phosphoglycolate phosphatase  28.57 
 
 
252 aa  45.1  0.0008  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3850  phosphoglycolate phosphatase  28.57 
 
 
252 aa  45.1  0.0008  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_3671  HAD-superfamily hydrolase, subfamily IA, variant 3  22.22 
 
 
199 aa  45.1  0.0008  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00000000314321  n/a   
 
 
-
 
NC_013743  Htur_2904  HAD-superfamily hydrolase, subfamily IA, variant 1  27.84 
 
 
238 aa  45.1  0.0008  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011353  ECH74115_4689  phosphoglycolate phosphatase  29.41 
 
 
252 aa  44.3  0.001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.663349  normal 
 
 
-
 
NC_007520  Tcr_0265  phosphoglycolate phosphatase  26.05 
 
 
227 aa  44.7  0.001  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03189  hypothetical protein  29.41 
 
 
252 aa  44.3  0.001  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0464  phosphoglycolate phosphatase  29.29 
 
 
251 aa  44.7  0.001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.992467  normal 
 
 
-
 
NC_007778  RPB_1973  epoxide hydrolase  34.33 
 
 
212 aa  44.3  0.001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0053  HAD family hydrolase  26.67 
 
 
207 aa  44.3  0.001  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1667  HAD family hydrolase  28.72 
 
 
199 aa  43.9  0.001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.0663843 
 
 
-
 
NC_010658  SbBS512_E3762  phosphoglycolate phosphatase  29.41 
 
 
252 aa  44.3  0.001  Shigella boydii CDC 3083-94  Bacteria  normal  0.40481  n/a   
 
 
-
 
NC_008148  Rxyl_0905  HAD family hydrolase  32.89 
 
 
204 aa  44.7  0.001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.427836  n/a   
 
 
-
 
NC_008390  Bamb_0440  phosphoglycolate phosphatase  29.29 
 
 
251 aa  44.7  0.001  Burkholderia ambifaria AMMD  Bacteria  normal  0.122838  n/a   
 
 
-
 
NC_008686  Pden_0043  HAD family hydrolase  32.08 
 
 
200 aa  44.7  0.001  Paracoccus denitrificans PD1222  Bacteria  normal  0.237358  normal 
 
 
-
 
NC_012791  Vapar_1100  HAD-superfamily hydrolase, subfamily IA, variant 3  31.78 
 
 
219 aa  44.7  0.001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3581  phosphoglycolate phosphatase  29.41 
 
 
252 aa  44.3  0.001  Escherichia coli HS  Bacteria  normal  0.284383  n/a   
 
 
-
 
NC_010468  EcolC_0328  phosphoglycolate phosphatase  29.41 
 
 
252 aa  44.3  0.001  Escherichia coli ATCC 8739  Bacteria  normal  0.372389  normal  0.201922 
 
 
-
 
NC_010498  EcSMS35_3661  phosphoglycolate phosphatase  29.41 
 
 
252 aa  44.3  0.001  Escherichia coli SMS-3-5  Bacteria  normal  0.29844  normal  0.025681 
 
 
-
 
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