| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2669 |
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| Symbol | |
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| ID | 4077580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2804811 |
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| End bp | 2805431 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007993 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_614663 |
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| Protein GI | 99082509 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATCA CCGCCGTCGT CTTTGATATT GGTCGCGTTC TCATTGAGTG GGAACCGGAG
CGCTTTTTTG ACCGTTTGAT CGGGGAGCCG CGCCGGCATG CGCTCTTTCA GGAGGTCGAT
CTGCATGGGG CGAACCTCGA TGTGGACCGC GGCTATCCCT TTCGCGAAAC GATTTATGGG
CTGGCGGACA AACACCCCGA CTGGGCCGCG GAGATCCGCC ATTGGCACGA CAGTTGGATC
GAGATGGCCA GCCCCGAGAT CCCGCATTCC GTGCGCCTGT TGCGCGCGCT CAAGGCCAAG
GGCGTGCCGG TCTATGCGCT GACGAATTTT GGCGCGGAGA CCTTTGTGAT CGCACAGACC
CATTATCCGT TCCTGCGCGA GTTCGATCAG GCGTTTGTGT CGGCGCATCT GCGGTGCATC
AAACCGGATG CGGAGATCTA TGCGCATCTG GAAGCGGGCA CCGGGCGACG CCCCGACGAG
CTGCTGTTCA CCGATGACCG CCCTGAAAAC GTCACCGCTG CTGCCGTGCG CGGCTGGCAC
ACCCATCTGT TCGATCGCCC CGAGACCTGG GCGGCGCGGT TGGTCGATGA GGGGCTGCTA
ACTCAAGAGG AGGCACAATG A
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| Protein sequence | MPITAVVFDI GRVLIEWEPE RFFDRLIGEP RRHALFQEVD LHGANLDVDR GYPFRETIYG
LADKHPDWAA EIRHWHDSWI EMASPEIPHS VRLLRALKAK GVPVYALTNF GAETFVIAQT
HYPFLREFDQ AFVSAHLRCI KPDAEIYAHL EAGTGRRPDE LLFTDDRPEN VTAAAVRGWH
THLFDRPETW AARLVDEGLL TQEEAQ
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