Gene SNSL254_A3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3754 
Symbolgph 
ID6483401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3618525 
End bp3619283 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content56% 
IMG OID642739021 
Productphosphoglycolate phosphatase 
Protein accessionYP_002042732 
Protein GI194445749 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGT TACAGAATAT TCGGGGCGTC GCCTTTGATC TTGACGGTAC GCTGGTGGAT 
AGCGCGCCGG GTCTTGCCGC GGCGGTGGAT ATGGCGCTGT ATGCGCTGGA ACTGCCGGTC
GCGGGCGAGG AGCGCGTGAT TACCTGGATT GGTAACGGCG CAGACGTATT GATGGAACGC
GCGCTGGCCT GGGCTCGCGA GGAGCGCGCC ACGCTGCGTA AGACGATGGG GAAACCGCCC
GTTGATGAAG ATATTCCTGC CGAGGAACAG GTACGCATTC TGCGTAAACT GTTCGACAGG
TATTATGGCG AAGTGGCGGA AGAGGGCACT TTTTTATTTC CGCATGTCGC CGACACGCTG
GGCGCGCTGC ACGCCAGCGG ATTGTCATTA GGTCTGGTGA CGAATAAGCC GACGCCGTTC
GTCGCGCCGT TGCTGGAATC GCTTGATATC GCCAAATACT TTAGTGTGGT TATCGGCGGC
GATGATGTGC AAAATAAGAA GCCGCATCCG GAGCCGCTGT TGCTGGTGGC AAGCCGGCTG
GGCATGATGC CGGAGCAGAT GCTTTTTGTC GGCGATTCGC GTAATGATAT TCAGGCTGCA
AAAGCGGCGG GCTGCCCTTC GGTTGGCCTG ACATACGGCT ACAATTATGG CGAAGCGATC
GCTCTTAGCG AGCCGGACGT CATTTATGAC AGTTTTAACG ATCTTTTGCC CGCACTTGGG
CTTCCGCATA GCGATAACCA GGAAATAAAA AATGACTAA
 
Protein sequence
MDKLQNIRGV AFDLDGTLVD SAPGLAAAVD MALYALELPV AGEERVITWI GNGADVLMER 
ALAWAREERA TLRKTMGKPP VDEDIPAEEQ VRILRKLFDR YYGEVAEEGT FLFPHVADTL
GALHASGLSL GLVTNKPTPF VAPLLESLDI AKYFSVVIGG DDVQNKKPHP EPLLLVASRL
GMMPEQMLFV GDSRNDIQAA KAAGCPSVGL TYGYNYGEAI ALSEPDVIYD SFNDLLPALG
LPHSDNQEIK ND