More than 300 homologs were found in PanDaTox collection
for query gene Svir_38090 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_38090  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  100 
 
 
194 aa  395  1e-109  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.516929  normal 
 
 
-
 
NC_013093  Amir_6895  HAD-superfamily hydrolase, subfamily IA, variant 3  50.52 
 
 
195 aa  193  1e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7952  HAD-superfamily hydrolase, subfamily IA, variant 3  43.08 
 
 
206 aa  152  2.9999999999999998e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7538  hydrolase (HAD superfamily)-like protein  41.58 
 
 
232 aa  134  9.999999999999999e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.763652 
 
 
-
 
NC_013172  Bfae_11470  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  38.86 
 
 
230 aa  127  8.000000000000001e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  0.241013  n/a   
 
 
-
 
NC_007333  Tfu_2117  HAD family hydrolase  39.46 
 
 
210 aa  118  4.9999999999999996e-26  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3350  HAD-superfamily hydrolase, subfamily IA, variant 3  39.39 
 
 
205 aa  117  9.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00377718  n/a   
 
 
-
 
NC_014210  Ndas_2108  HAD-superfamily hydrolase, subfamily IA, variant 3  34.2 
 
 
203 aa  111  8.000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.133386  normal 
 
 
-
 
NC_008009  Acid345_0142  HAD family hydrolase  32.07 
 
 
212 aa  104  8e-22  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  hitchhiker  0.0023385 
 
 
-
 
NC_008530  LGAS_0945  HAD superfamily hydrolase  25.26 
 
 
199 aa  73.9  0.000000000001  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000164408  normal 
 
 
-
 
NC_009457  VC0395_A1251  HAD family phosphatase  31 
 
 
202 aa  71.6  0.000000000007  Vibrio cholerae O395  Bacteria  hitchhiker  0.000890892  n/a   
 
 
-
 
NC_013093  Amir_3459  HAD-superfamily hydrolase, subfamily IA, variant 3  37.14 
 
 
216 aa  70.1  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0792688  n/a   
 
 
-
 
NC_010644  Emin_0468  HAD family hydrolase  32.71 
 
 
202 aa  68.6  0.00000000006  Elusimicrobium minutum Pei191  Bacteria  normal  0.85334  hitchhiker  0.00430907 
 
 
-
 
NC_009718  Fnod_0412  HAD family hydrolase  33.63 
 
 
223 aa  68.2  0.00000000008  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2026  HAD family hydrolase  35.64 
 
 
203 aa  67.4  0.0000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.151114  normal  0.583157 
 
 
-
 
NC_009485  BBta_4490  putative haloacid dehalogenase-like hydrolase  30.46 
 
 
209 aa  67.8  0.0000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3178  Haloacid dehalogenase domain protein hydrolase  37.14 
 
 
230 aa  67.8  0.0000000001  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00001464  n/a   
 
 
-
 
NC_009654  Mmwyl1_3008  HAD family hydrolase  27.04 
 
 
206 aa  66.2  0.0000000003  Marinomonas sp. MWYL1  Bacteria  normal  0.103903  normal  0.720985 
 
 
-
 
NC_009565  TBFG_13412  hypothetical protein  33.61 
 
 
217 aa  65.5  0.0000000005  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0651  HAD-superfamily hydrolase, subfamily IA, variant 3  35.85 
 
 
205 aa  65.1  0.0000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.286753 
 
 
-
 
NC_012791  Vapar_1100  HAD-superfamily hydrolase, subfamily IA, variant 3  46.84 
 
 
219 aa  65.1  0.0000000006  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0532  HAD superfamily hydrolase-like protein  38.54 
 
 
163 aa  64.3  0.000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2805  HAD family hydrolase  30.48 
 
 
208 aa  63.2  0.000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.187459 
 
 
-
 
NC_013721  HMPREF0424_0848  HAD hydrolase, family IA, variant 3  33.04 
 
 
216 aa  63.2  0.000000003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_6303  HAD-superfamily hydrolase, subfamily IA, variant 3  46.05 
 
 
133 aa  62.4  0.000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2884  Haloacid dehalogenase domain protein hydrolase  36.96 
 
 
202 aa  62.4  0.000000004  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4363  phosphatase  29.17 
 
 
199 aa  62  0.000000005  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4270  phosphatase  29.17 
 
 
199 aa  62  0.000000005  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_5332  phosphatase  29.17 
 
 
199 aa  62  0.000000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.284807 
 
 
-
 
CP001509  ECD_03770  phosphatase  29.17 
 
 
199 aa  61.6  0.000000006  Escherichia coli BL21(DE3)  Bacteria  normal  0.943463  n/a   
 
 
-
 
CP001637  EcDH1_4101  HAD-superfamily hydrolase, subfamily IA, variant 3  29.17 
 
 
199 aa  61.6  0.000000006  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3384  HAD family hydrolase  38.32 
 
 
206 aa  61.6  0.000000006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010468  EcolC_4133  phosphatase  29.17 
 
 
199 aa  61.6  0.000000006  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_03719  hypothetical protein  29.17 
 
 
199 aa  61.6  0.000000006  Escherichia coli BL21  Bacteria  normal  0.77682  n/a   
 
 
-
 
NC_009801  EcE24377A_4408  phosphatase  29.17 
 
 
199 aa  61.6  0.000000006  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4110  phosphatase  29.17 
 
 
199 aa  61.6  0.000000006  Escherichia coli HS  Bacteria  normal  0.0806852  n/a   
 
 
-
 
NC_009486  Tpet_0288  HAD family hydrolase  25.76 
 
 
203 aa  61.6  0.000000007  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0029  phosphatase  27.89 
 
 
196 aa  61.6  0.000000007  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2835  HAD family hydrolase  31.55 
 
 
231 aa  61.2  0.000000009  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.160416  normal 
 
 
-
 
NC_008347  Mmar10_2528  HAD family hydrolase  34.62 
 
 
204 aa  61.2  0.000000009  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_4187  phosphatase  27.21 
 
 
196 aa  60.5  0.00000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4881  HAD family hydrolase  28.33 
 
 
211 aa  61.2  0.00000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C4350  phosphatase  26.2 
 
 
199 aa  60.8  0.00000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A0033  phosphatase  27.21 
 
 
196 aa  60.5  0.00000001  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4415  phosphatase  26.2 
 
 
199 aa  60.8  0.00000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A4304  phosphatase  26.2 
 
 
199 aa  60.8  0.00000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.766315  normal 
 
 
-
 
NC_011149  SeAg_B4259  phosphatase  26.2 
 
 
199 aa  60.8  0.00000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4237  phosphatase  26.2 
 
 
199 aa  60.8  0.00000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1551  HAD family hydrolase  32.95 
 
 
224 aa  59.7  0.00000002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0524  putative HAD superfamily hydrolase  27.67 
 
 
209 aa  60.1  0.00000002  Bifidobacterium longum DJO10A  Bacteria  normal  0.172538  n/a   
 
 
-
 
NC_008686  Pden_0043  HAD family hydrolase  35.04 
 
 
200 aa  59.7  0.00000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.237358  normal 
 
 
-
 
NC_010483  TRQ2_0287  HAD family hydrolase  25.76 
 
 
205 aa  59.3  0.00000004  Thermotoga sp. RQ2  Bacteria  normal  0.146619  n/a   
 
 
-
 
NC_014150  Bmur_1926  HAD-superfamily hydrolase, subfamily IA, variant 3  29.2 
 
 
201 aa  59.3  0.00000004  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0706  HAD-superfamily hydrolase, subfamily IA, variant 3  33.96 
 
 
204 aa  58.5  0.00000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.182073  normal 
 
 
-
 
NC_011004  Rpal_3244  HAD-superfamily hydrolase, subfamily IA, variant 3  28.22 
 
 
208 aa  58.5  0.00000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0504  HAD-superfamily hydrolase, subfamily IA, variant 3  32.23 
 
 
233 aa  58.5  0.00000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011368  Rleg2_4436  HAD-superfamily hydrolase, subfamily IA, variant 3  37.89 
 
 
216 aa  58.2  0.00000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00258568  normal 
 
 
-
 
NC_013159  Svir_30870  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  41.03 
 
 
133 aa  58.2  0.00000007  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0136  HAD-superfamily hydrolase, subfamily IA, variant 3  27.91 
 
 
225 aa  57.8  0.00000009  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2292  HAD-superfamily hydrolase subfamily IA, variant 3  26.83 
 
 
228 aa  57.4  0.0000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.138759  normal  0.0114246 
 
 
-
 
NC_013552  DhcVS_338  hypothetical protein  29.46 
 
 
456 aa  57.4  0.0000001  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00693249  n/a   
 
 
-
 
NC_014158  Tpau_1856  HAD-superfamily hydrolase, subfamily IA, variant 3  35.4 
 
 
224 aa  57.4  0.0000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0570  epoxide hydrolase domain-containing phosphatase  28.84 
 
 
214 aa  57.4  0.0000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.457347  n/a   
 
 
-
 
NC_009436  Ent638_4093  phosphatase  25.52 
 
 
199 aa  57  0.0000001  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0395  glycoprotease family protein/hydrolase, beta-phosphoglucomutase family  29.46 
 
 
456 aa  56.6  0.0000002  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1436  hypothetical protein  33.58 
 
 
214 aa  57  0.0000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0136141  normal  0.0979488 
 
 
-
 
NC_014151  Cfla_3580  HAD-superfamily hydrolase, subfamily IA, variant 3  28.9 
 
 
212 aa  57  0.0000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2434  HAD-superfamily hydrolase, subfamily IA, variant 3  32.05 
 
 
298 aa  57  0.0000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3728  HAD-superfamily hydrolase, subfamily IA, variant 3  35 
 
 
224 aa  56.6  0.0000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.93668  normal 
 
 
-
 
NC_013739  Cwoe_1828  HAD-superfamily hydrolase, subfamily IA, variant 3  31.85 
 
 
211 aa  56.2  0.0000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.978388 
 
 
-
 
NC_010003  Pmob_0976  HAD family hydrolase  26.38 
 
 
198 aa  56.2  0.0000003  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1151  HAD family hydrolase  36.08 
 
 
219 aa  55.8  0.0000004  Roseiflexus sp. RS-1  Bacteria  normal  0.205266  hitchhiker  0.00490249 
 
 
-
 
NC_007908  Rfer_1128  HAD family hydrolase  35.71 
 
 
214 aa  55.5  0.0000005  Rhodoferax ferrireducens T118  Bacteria  normal  0.893823  n/a   
 
 
-
 
NC_008025  Dgeo_1288  HAD family hydrolase  26.06 
 
 
212 aa  55.5  0.0000005  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.888389  normal 
 
 
-
 
NC_009455  DehaBAV1_0374  HAD family hydrolase  28.12 
 
 
456 aa  55.1  0.0000007  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000852801  n/a   
 
 
-
 
NC_013517  Sterm_3671  HAD-superfamily hydrolase, subfamily IA, variant 3  29.7 
 
 
199 aa  54.7  0.0000008  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00000000314321  n/a   
 
 
-
 
NC_004311  BRA1167  HAD superfamily hydrolase  35.79 
 
 
214 aa  54.3  0.000001  Brucella suis 1330  Bacteria  normal  0.484596  n/a   
 
 
-
 
NC_013131  Caci_7621  HAD-superfamily hydrolase, subfamily IA, variant 3  38.64 
 
 
200 aa  54.3  0.000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1639  Haloacid dehalogenase domain-containing protein hydrolase  28.26 
 
 
231 aa  54.3  0.000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.189012  normal  0.175401 
 
 
-
 
NC_007951  Bxe_A0441  putative L-2-haloalkanoic acid dehalogenase (HAD aspartate-nucleophile hydrolase)  33.63 
 
 
207 aa  54.3  0.000001  Burkholderia xenovorans LB400  Bacteria  normal  0.238349  normal 
 
 
-
 
NC_009616  Tmel_0900  HAD family hydrolase  27.96 
 
 
196 aa  53.9  0.000001  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2011  HAD-superfamily hydrolase  29.7 
 
 
204 aa  53.9  0.000001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0579  HAD-superfamily hydrolase  29.7 
 
 
204 aa  53.5  0.000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0436  HAD-superfamily hydrolase  29.7 
 
 
268 aa  53.1  0.000002  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4501  phosphatase  25 
 
 
203 aa  53.1  0.000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.355951  n/a   
 
 
-
 
NC_013521  Sked_18080  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  37.23 
 
 
211 aa  53.5  0.000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.588171  normal  0.386622 
 
 
-
 
NC_013131  Caci_1146  HAD-superfamily hydrolase, subfamily IA, variant 3  41.67 
 
 
210 aa  53.5  0.000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4218  phosphatase  25 
 
 
203 aa  53.1  0.000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0888  HAD-superfamily hydrolase  29.7 
 
 
217 aa  53.5  0.000002  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1918  HAD family hydrolase  29.7 
 
 
217 aa  53.5  0.000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1855  HAD family hydrolase  29.7 
 
 
204 aa  53.5  0.000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2047  HAD-superfamily hydrolase, subfamily IA, variant 3  31.19 
 
 
211 aa  53.5  0.000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.044759 
 
 
-
 
NC_011884  Cyan7425_3373  HAD-superfamily hydrolase, subfamily IA, variant 3  30.19 
 
 
231 aa  52.8  0.000003  Cyanothece sp. PCC 7425  Bacteria  normal  0.154909  normal  0.78527 
 
 
-
 
NC_009485  BBta_0649  hydrolase  40.38 
 
 
211 aa  52.8  0.000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1967  putative HAD superfamily hydrolase  26.5 
 
 
234 aa  52.8  0.000003  Bifidobacterium longum DJO10A  Bacteria  normal  0.0600927  n/a   
 
 
-
 
NC_013457  VEA_000290  HAD superfamily hydrolase  31.43 
 
 
205 aa  52.8  0.000003  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4019  HAD-superfamily hydrolase, subfamily IA, variant 3  33.33 
 
 
232 aa  52  0.000005  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0842123  n/a   
 
 
-
 
NC_007958  RPD_3413  epoxide hydrolase-like phosphatase  25 
 
 
210 aa  52  0.000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.15685  normal  0.959449 
 
 
-
 
NC_013161  Cyan8802_0709  REG-2-like, HAD superfamily (subfamily IA) hydrolase  28.32 
 
 
233 aa  52  0.000005  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0854656 
 
 
-
 
NC_011726  PCC8801_0682  REG-2-like, HAD superfamily (subfamily IA) hydrolase  28.32 
 
 
233 aa  52  0.000005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
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