Gene EcolC_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0328 
Symbol 
ID6065474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp380540 
End bp381298 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content53% 
IMG OID641599727 
Productphosphoglycolate phosphatase 
Protein accessionYP_001723333 
Protein GI170018379 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.372389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.201922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT TTGAAGATAT TCGCGGCGTC GCTTTTGATC TCGACGGTAC GCTGGTGGAC 
AGTGCTCCCG GTCTTGCTGC TGCGGTAGAT ATGGCGCTGT ATGCGTTGGA GTTACCCGTC
GCAGGTGAAG AACGCGTTAT TACCTGGATT GGTAACGGCG CAGATGTTCT GATGGAGCGC
GCATTGACCT GGGCGCGTCA GGAACGTGCG ACTCTGCGTA AAACAATGGG TAAACCGCCC
GTTGATGACG ACATTCCGGC AGAAGAACAG GTACGTATTC TGCGTAAACT GTTCGATCGC
TATTATGGCG AGGTTGCCGA AGAGGGGACG TTTTTGTTCC CGCACGTTGC CGATACGTTG
GGCGCGTTGC AGGCTAAAGG CCTGCCGCTA GGCCTGGTCA CCAACAAACC GACGCCGTTC
GTCGCGCCGC TGCTCGAAGC CTTAGATATT GCCAAATACT TTAGCGTGGT TATCGGCGGC
GATGATGTGC AAAACAAAAA ACCTCATCCG GACCCGCTGT TACTGGTGGC TGAGCGGATG
GGAATTGCCC CACAACAGAT GCTGTTTGTC GGCGACTCAC GCAATGATAT TCAGGCGGCA
AAAGCGGCAG GTTGCCCATC CGTTGGCTTA ACCTACGGAT ATAACTACGG CGAGGCTATC
GATCTCAGCC AGCCTGATGT AATTTATCAG TCTATAAATG ACCTTCTGCC CGCATTAGGG
CTTCCGCATA GCGAAAATCA GGAATCGAAA AATGACTAA
 
Protein sequence
MSKFEDIRGV AFDLDGTLVD SAPGLAAAVD MALYALELPV AGEERVITWI GNGADVLMER 
ALTWARQERA TLRKTMGKPP VDDDIPAEEQ VRILRKLFDR YYGEVAEEGT FLFPHVADTL
GALQAKGLPL GLVTNKPTPF VAPLLEALDI AKYFSVVIGG DDVQNKKPHP DPLLLVAERM
GIAPQQMLFV GDSRNDIQAA KAAGCPSVGL TYGYNYGEAI DLSQPDVIYQ SINDLLPALG
LPHSENQESK ND