| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7621 |
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| Symbol | |
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| ID | 8338997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8844067 |
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| End bp | 8844669 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644960705 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003118286 |
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| Protein GI | 256396722 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGATCC GAGCGATAGT CCTGGACATC GGCGGGGTCC TGGAGCACAC CCCGGACCTC
GGCACCGCGG CGCGCTGGGA GCCCGAGTTC GGCGCCGGCT GGGCGAACCG CGTCGAGGCC
GTCTTCCAGG CCGGCGAGCT CGGCCACATC ACGCTCGAGG AAGTCCACGA ACGGTCCGTC
GCCGCCCTCG GGGTGCCGGC GGACCGCTTC GCGGCGTACA TGGCAGACGT CTGGGTCGAG
TACCTCGGCA CGTACAACGC CGAGATGGCC GACTACTGGC GCGCCCGCCG CGCCGAGGGC
TACGCCACCG CGATCATCAG CAACAGCTTC GTCGGCGCGC GCGAGCGCGA GGAGGAGGCG
TACCGGTTCA GCGAGCTGAC CGACCTGATC GTGTACTCGC ACGAGGTCGG GATGCAGAAG
CCGGACCCCG GCATCTACGA GCTCTGTCTG GAGCGGCTCG GCATCCCGGC CGAGGAGACC
GTGTTCGTGG ACGACCTCGA GGCGAACTGC GCCGCGGCTC GCGCCCTCGG CATGTCCGCG
ATCCTCTTCC AGGACACCGC GCAAGTCATC CGCGAGCTCG ACGAACTGCT GCTCAAGACC
TGA
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| Protein sequence | MPIRAIVLDI GGVLEHTPDL GTAARWEPEF GAGWANRVEA VFQAGELGHI TLEEVHERSV
AALGVPADRF AAYMADVWVE YLGTYNAEMA DYWRARRAEG YATAIISNSF VGAREREEEA
YRFSELTDLI VYSHEVGMQK PDPGIYELCL ERLGIPAEET VFVDDLEANC AAARALGMSA
ILFQDTAQVI RELDELLLKT
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