| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_18080 |
|---|
| Symbol | |
|---|
| ID | 8633444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2017067 |
|---|
| End bp | 2017702 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| Protein accession | YP_003314569 |
|---|
| Protein GI | 269795114 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.588171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.386622 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGCA CGGCGCACGA CAGCGCGACC CGCCCGCAGG TGGACACCGT CCTCTACGAC
CTCGGCAACG TCCTCGTCGG CTGGGACCCC TACGGTCCCT TCGTCGGGCT CGACCGTGCG
GAGGTCGACA GGTTCTTCGA CGAGACCGAC TTCCTGGCGC ACAACCACGA GCAGGACGCC
GGCCGGCCCT GGGCGGAGCT GCGGGCCCTC GTCGCAGCCT CCTGGCCGCA GCACGCGCAC
CTCGTCGACC GCTACGTCGA CGGCTTCGCC GCGAGCCTCA CCGGACCGGT CCCCGGGTCG
GCGGAGATCG TCGACGAGCT CGCCGCGTCG GGGGCGCGGC TCTACGGCCT CACCAACTGG
TCGGCCGAGC TGTTCCACCA CGCCGTCCCG GCAGCCCCGG CGATCGGGCG CCTCGAGGGC
ATCGTCGTCT CGGGCGAGGT CGGGCTGGCC AAGCCCGCCC CGGAGATCTT CCGGCTGACC
GTCGAGACCT TCGGCCTCGA CCCCGCCCGC ACGGTCTTCG TCGACGACTC GCTCCCCAAC
GTGCGCTCCG CGCAGGACGT CGGGCTGCAT GCCGTGCACT TCACCACCTC CGCGGCGCTG
CGCGACGAGC TCGTCGCGCT CGGCCTGCTG GGCTGA
|
|---|
| Protein sequence | MTGTAHDSAT RPQVDTVLYD LGNVLVGWDP YGPFVGLDRA EVDRFFDETD FLAHNHEQDA
GRPWAELRAL VAASWPQHAH LVDRYVDGFA ASLTGPVPGS AEIVDELAAS GARLYGLTNW
SAELFHHAVP AAPAIGRLEG IVVSGEVGLA KPAPEIFRLT VETFGLDPAR TVFVDDSLPN
VRSAQDVGLH AVHFTTSAAL RDELVALGLL G
|
|---|
| |