Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3728 |
Symbol | |
ID | 9247597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4477152 |
End bp | 4477826 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_003681632 |
Protein GI | 297562658 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.93668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGCA CCCGGCGAGG GGTCATCTGC GACTGGGGCG GTGTCCTCAC ACCGCCGCTG CCCGTGGGCA TCCGGGCCTG GCTGCACGCC GACCGCATCG ACGTCGAGCA CTACCACGAG GTCATGCGGC CCTACTTCGA CGGCAGCGTC GAGGGGGAGA ACCTCGTGCA CGCGCTGGAG CGGGGCGAGA TCGACACCTG CGTGTTCGAG CGCGAGCTGG CGGCCCTGCT GCGCTGCACG CACGGCGGCC CGGTGGTGGC CGAGGGGCTG ATCAACCGCA TGTTCTGCGA GTTCGACCCC GTGCACGACA TGTACGAGGC CCTGCGCGAG GCCAGGACCG CCGGGGCCGT GACCGCCCTG CTGTCCAACT CCTGGGGCAA CTGCTATCCC CGTGAGCACT TCGACACCAC CTTCGACGCG GTGGTGATCT CGGGCGAGGT GGGGATGCGC AAGCCCGAGC ACCGCATCTA CCTGCACACC TGTGAGCGGA TCGGCCTGCG CCCCGAGGAC TGCGTGTTCA TCGACGACCT GGAGCACAAC GTCCGCACGG CCGAGGAACT CGGGATGACC GGCATCCTGC ACACCGACGT GGACACCACG CGGCTGGAGC TGGAGCGCTT CCTGGCGCCG GACGGCGACG GCGCGCCCCC GGTGCCCGGG GAGCGGGCGG CCTGA
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Protein sequence | MDGTRRGVIC DWGGVLTPPL PVGIRAWLHA DRIDVEHYHE VMRPYFDGSV EGENLVHALE RGEIDTCVFE RELAALLRCT HGGPVVAEGL INRMFCEFDP VHDMYEALRE ARTAGAVTAL LSNSWGNCYP REHFDTTFDA VVISGEVGMR KPEHRIYLHT CERIGLRPED CVFIDDLEHN VRTAEELGMT GILHTDVDTT RLELERFLAP DGDGAPPVPG ERAA
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