Gene SbBS512_E3762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3762 
Symbolgph 
ID6270055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3487890 
End bp3488648 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content53% 
IMG OID641727625 
Productphosphoglycolate phosphatase 
Protein accessionYP_001882060 
Protein GI187732490 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.40481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGT TTGAAGATAT TCGCGGCGTC GCTTTTGATC TCGACGGTAC GCTGGTTGAC 
AGTGCTCCCG GTCTTGCTGC TGCGGTAGAT ATGGCGCTGT ATGCGCTGGA GTTACCCGTC
GCAGGTGAAG AACGCGTTAT TACCTGGATT GGTAACGGCG CAGATGTTCT GATGGAGCGT
GCATTGGCCT GGGCGCGTCA GGAACGTGCG ACTCTGCGTA AAACAATGGG TAAACCGCCC
GTTGATGACG ACATTCCGGC AGAAGAACAG GTACGTATTC TGCGTAAACT GTTCGATCGC
TACTATAGCG AGGTTGCCGA AGAGGGGACG TTTTTGTTCC CGCACGTTGC CGATACGTTG
GGCGCGTTGC AGGCTAAAGG CCTGCCGCTA GGCCTGGTCA CCAACAAACC GACGCCGTTC
GTCGCGCCAC TGCTCGAAGC CTTAGATATT GCCAAATACT TTAGCGTGGT TATCGGCGGC
GATGATGTGC AAAACAAAAA ACCGCATCCG GACCCGCTGT TACTGGTGGC TGAGCGGATG
GGAATTGCCC CACAACAGAT GCTGTTTGTC GGCGACTCAC GCAATGATAT TCAGGCGGCA
AAAGCGGCAG GTTGCCCATC AGTTGGCTTA ACCTACGGAT ATAACTACGG CGAGGCTATC
GATCTCAGCC AGCCTGATGT AATTTATCAG TCTATAAATG ACCTTCTGCC CGCATTAGGG
CTTCCGCATA GCGAAAATCA GGAATCGAAA AATGACTAA
 
Protein sequence
MNKFEDIRGV AFDLDGTLVD SAPGLAAAVD MALYALELPV AGEERVITWI GNGADVLMER 
ALAWARQERA TLRKTMGKPP VDDDIPAEEQ VRILRKLFDR YYSEVAEEGT FLFPHVADTL
GALQAKGLPL GLVTNKPTPF VAPLLEALDI AKYFSVVIGG DDVQNKKPHP DPLLLVAERM
GIAPQQMLFV GDSRNDIQAA KAAGCPSVGL TYGYNYGEAI DLSQPDVIYQ SINDLLPALG
LPHSENQESK ND