Gene EcSMS35_3661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3661 
Symbolgph 
ID6145268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3720420 
End bp3721178 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content52% 
IMG OID641618488 
Productphosphoglycolate phosphatase 
Protein accessionYP_001745628 
Protein GI170681789 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.29844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.025681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGT TTGAAGATAT TCGCGGCGTC GCTTTTGATC TCGACGGTAC GCTGGTGGAC 
AGTGCTCCTG GCTTGGCTAC CGCAGTAGAT ATGGCGCTGT ATGCGCTGGA GTTGCCCGTC
GCAGGTGAAG AACGCGTTAT AACCTGGATT GGTAACGGCG CAGATGTTCT GATGGAGCGC
GCATTGACCT GGGCGCGTCA GGAACGTGCG ACTCTGCGTA AAACAATGGG TAAACCGCCC
GTTGATGACG ACATTCCGGC AGAAGAACAA GTACGTATTC TGCGTAAACT GTTCGATCGC
TACTATGGCG AGGTTGCCGA AGAGGGGACG TTTTTGTTCC CGCACGTTGC CGATACGCTG
GGCGCATTGC AGGCTAAAGG CCTGCCGCTA GGTCTGGTCA CCAACAAACC GACGCCGTTC
GTCGCGCCGC TGCTCGAAGC CTTAGATATC GCCAAATACT TCAGCGTGGT AATTGGTGGT
GATGATGTGC AAAACAAAAA ACCGCATCCG GACCCGCTGT TACTGGTGGC TGAGCGGATG
GGAATTGCTC CACAACAGAT GCTGTTTGTT GGCGACTCAC GCAATGATAT TCAGGCAGCA
AAAGCGGCAG GTTGCCCATC AGTTGGCTTA ACCTACGGAT ATAACTACGG CGAGGCTATC
GATCTCAGCC AGCCTGATGT AATTTATCAG TCTATAAATG ACCTTCTGCC CGCATTAGGG
CTTCCGCATA GCGAAAATCA GGAATCGAAA AATGACTAA
 
Protein sequence
MNKFEDIRGV AFDLDGTLVD SAPGLATAVD MALYALELPV AGEERVITWI GNGADVLMER 
ALTWARQERA TLRKTMGKPP VDDDIPAEEQ VRILRKLFDR YYGEVAEEGT FLFPHVADTL
GALQAKGLPL GLVTNKPTPF VAPLLEALDI AKYFSVVIGG DDVQNKKPHP DPLLLVAERM
GIAPQQMLFV GDSRNDIQAA KAAGCPSVGL TYGYNYGEAI DLSQPDVIYQ SINDLLPALG
LPHSENQESK ND