| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3661 |
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| Symbol | gph |
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| ID | 6145268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3720420 |
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| End bp | 3721178 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618488 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001745628 |
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| Protein GI | 170681789 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.29844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.025681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGT TTGAAGATAT TCGCGGCGTC GCTTTTGATC TCGACGGTAC GCTGGTGGAC
AGTGCTCCTG GCTTGGCTAC CGCAGTAGAT ATGGCGCTGT ATGCGCTGGA GTTGCCCGTC
GCAGGTGAAG AACGCGTTAT AACCTGGATT GGTAACGGCG CAGATGTTCT GATGGAGCGC
GCATTGACCT GGGCGCGTCA GGAACGTGCG ACTCTGCGTA AAACAATGGG TAAACCGCCC
GTTGATGACG ACATTCCGGC AGAAGAACAA GTACGTATTC TGCGTAAACT GTTCGATCGC
TACTATGGCG AGGTTGCCGA AGAGGGGACG TTTTTGTTCC CGCACGTTGC CGATACGCTG
GGCGCATTGC AGGCTAAAGG CCTGCCGCTA GGTCTGGTCA CCAACAAACC GACGCCGTTC
GTCGCGCCGC TGCTCGAAGC CTTAGATATC GCCAAATACT TCAGCGTGGT AATTGGTGGT
GATGATGTGC AAAACAAAAA ACCGCATCCG GACCCGCTGT TACTGGTGGC TGAGCGGATG
GGAATTGCTC CACAACAGAT GCTGTTTGTT GGCGACTCAC GCAATGATAT TCAGGCAGCA
AAAGCGGCAG GTTGCCCATC AGTTGGCTTA ACCTACGGAT ATAACTACGG CGAGGCTATC
GATCTCAGCC AGCCTGATGT AATTTATCAG TCTATAAATG ACCTTCTGCC CGCATTAGGG
CTTCCGCATA GCGAAAATCA GGAATCGAAA AATGACTAA
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| Protein sequence | MNKFEDIRGV AFDLDGTLVD SAPGLATAVD MALYALELPV AGEERVITWI GNGADVLMER
ALTWARQERA TLRKTMGKPP VDDDIPAEEQ VRILRKLFDR YYGEVAEEGT FLFPHVADTL
GALQAKGLPL GLVTNKPTPF VAPLLEALDI AKYFSVVIGG DDVQNKKPHP DPLLLVAERM
GIAPQQMLFV GDSRNDIQAA KAAGCPSVGL TYGYNYGEAI DLSQPDVIYQ SINDLLPALG
LPHSENQESK ND
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