| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0706 |
|---|
| Symbol | |
|---|
| ID | 8011875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 732880 |
|---|
| End bp | 733494 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644823295 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
|---|
| Protein accession | YP_002974548 |
|---|
| Protein GI | 241203452 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.182073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG ACATAAGACA TATCGTTTTC GATATCGGCA AAGTCCTTAT TCATTACGAT
CCGCATCTTC CCTTCAGCCG GCTCATTCCC GATGAGACCG AGCGCAACTG GTTCTTCACC
AATATCTGCA CCCATGACTG GAACATCGAG CAGGACCGCG GCCGCACCTG GGCGGAGGCC
GAAGCGCTGC TGATAAAACA GCACCCGGCG CGCGAAGAGC ATATCCGCGC CTTCCGCAAA
TATTGGCACG AGATGGTGCC GCACGCCTAT GATGACAGCG TCGCGATCAT GGAAGGGCTG
ATCGCCGAAG GGCGTGACGT GACGATGCTG ACAAACTTCG CCTCCGACAC CTTCCGCGAG
GCGCAGGCGC GCTTCCCCTT TCTGACCAAA CCACGTGGCG TCACCGTTTC CGGCGATGTC
GGCCTGATCA AGCCGGATAT CGCGATCTAC GAGACGCATA CGAAAAGCTT CGGCCTCGAT
CCGGCAGCGA CGATCTTCAT CGACGACGCA CCTGTTAATG TCGAAGGCGC CAAGGCCTAT
GGCTGGAATG CGGTGCTGTT TTCGGGGCCT GAGAAGCTGC GCAGCGATCT TGCCGCTTAC
GGATTGAAGG TCTGA
|
|---|
| Protein sequence | MTTDIRHIVF DIGKVLIHYD PHLPFSRLIP DETERNWFFT NICTHDWNIE QDRGRTWAEA
EALLIKQHPA REEHIRAFRK YWHEMVPHAY DDSVAIMEGL IAEGRDVTML TNFASDTFRE
AQARFPFLTK PRGVTVSGDV GLIKPDIAIY ETHTKSFGLD PAATIFIDDA PVNVEGAKAY
GWNAVLFSGP EKLRSDLAAY GLKV
|
|---|
| |