| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0043 |
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| Symbol | |
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| ID | 4579074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 35028 |
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| End bp | 35630 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639767354 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_913856 |
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| Protein GI | 119382800 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.237358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCG TGATCTTCGA CCTGGGTGGG GTGCTGATCG ACTGGGATCC GGCGCTGGCC
TTTGCGGATG TGTTCACCAG CCGGGCCGAG GCTGAAGCCT GGATGAAGCG CATCGGTTTT
GCCGACTGGA ACCGGATACA GGACGGTGGG CGCAGCTTTG CCGAGGGGGT GGCCGCCGCC
CGCGCCGTCC ATGGCGACGA GGCGCGGCAT CTGGCCGGCT ATCCGCTGGC CTTTCCGGTC
GCCATCGAAA AGACCGTGCC CGGCACCTGG GCGATTGCCG AGGCGCTTCT GGCGCGCGGC
GTGCCGCTTT ATGCGCTGAC CAACTGGTCG GCCGAAACCT GGCCGCATGC GCTGGAACTG
CATCCCCGGC TGGGCGGGCT TTTTACCGAT ATCCTGGTCT CGGGCCAGGT CGGCGTGCTG
AAGCCCGAGC CGGCGATCTA TCGGCTGCTG ATGGATCGCA ACGGGCTGGT GGCCGAGGAT
TGCATCTTCA TCGACGACAG CGCGGCCAAT GCCGAGGGCG CCCGCGCGCT GGGCATCGAC
GCGATCCACT TTACGGGCGC CGAGGCGCTG GGCGAGGAGC TGGCGCGGCG CGGGCTGTTC
TGA
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| Protein sequence | MKSVIFDLGG VLIDWDPALA FADVFTSRAE AEAWMKRIGF ADWNRIQDGG RSFAEGVAAA
RAVHGDEARH LAGYPLAFPV AIEKTVPGTW AIAEALLARG VPLYALTNWS AETWPHALEL
HPRLGGLFTD ILVSGQVGVL KPEPAIYRLL MDRNGLVAED CIFIDDSAAN AEGARALGID
AIHFTGAEAL GEELARRGLF
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