| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1787 |
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| Symbol | |
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| ID | 7173703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2186983 |
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| End bp | 2187639 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643540302 |
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| Product | Haloacid dehalogenase domain protein hydrolase |
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| Protein accession | YP_002436199 |
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| Protein GI | 218886878 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 0.170193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACACT CGCGCGGCAA TGCCGCACCC CACATTGACG TCATCTTCTT CGACTTCAGC
GGCGTGCTGG CCGAGGAAGG CTTCATCGAA GGCCTGCGCG CCATCGGACG CGCCCAGGGC
CTGGACCCGG AAGCCGCCAT GCACACGGCC ACCGACCTTT GCTACTCCAC CGGCTACGTC
AACGGCAGGG CCGACGAGGC CGCATGGTGG AACGCCGTGC GCGCGGCCAC CGGCATGACC
GGCACCGACG CCGCCCTGCG CGCGGAGATC ATGAACCGCT TCACCGTGCG TCCGGAAATG
CTGCGCGCCG CCGACGCGGT GCGCGCCGCC GGGCTGCGCA CGGCCATCCT GAGCGACCAT
ACCAACTGGC TGGAGGAAAT CGACGCGGCG CACGGCGTGT ACCGCCACTT CGACCGGGTG
TTCAATTCGT TCCGCGAGGG GCTGAACAAG CGCGACCCCG GCTTCTTCAC CCACGCCACG
GCCATCATGG GCGTGGCCCC GGCGCGCGCG GCCTTTTTCG ACGACAACGT CGGGCACATC
GGGCGGGCAA CCGCGCTGGG CATCCAGGCC CGGCTGTTCA CCGGGCACGA CGCCTTCCGC
GCCGACCTGG CCGCGCTGGC CCCGCAGGTG GCGCTGCCCG CAGGGTGGCC GGGGTAG
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| Protein sequence | MTHSRGNAAP HIDVIFFDFS GVLAEEGFIE GLRAIGRAQG LDPEAAMHTA TDLCYSTGYV
NGRADEAAWW NAVRAATGMT GTDAALRAEI MNRFTVRPEM LRAADAVRAA GLRTAILSDH
TNWLEEIDAA HGVYRHFDRV FNSFREGLNK RDPGFFTHAT AIMGVAPARA AFFDDNVGHI
GRATALGIQA RLFTGHDAFR ADLAALAPQV ALPAGWPG
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